LOC103031742


Basic Information

Item Value
gene id LOC103031742
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 11945426 ~ 11968401 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022678030.1
GTATAATATACTTCatttaatacttaaaataaatagtcAATAATTACACATTTGTGAATGGAAactatcagccaatcagagcacagGGGGCGGGACTTGTCTGAATAGGGGTGTTGAGAGCAGTCCTTCagttcagtttcagcagtgtaGAGCTCAGCAGTAGGACAGCTCGGATCAGATAGAGTACAGGTGTAGAGCTGCAGCGCTGGTTCTCCTGGCTGGTTCTAGCTGAGACTGAGAGCTGGAGCTGGGCATGGCGGGGGCAGCGGGACTCAGCTTTGTGTTTGGAGTGTTCTCAGTGATTCAGTGTGAGGGGGTCTTCACTGAGGGGCTGAGAGGTGGTGCCTCCAGTGCAGTCTTTCAGAGATCTTCTGATGTAGTGAGTGCAGCCATGGACGTGAACCTCCACAAAGCACAGAGAGAACCAGGGGCAGAGCCGCCACCGTCCCTCAGACAGGGAGGCCACTCACTGCTCCAAGAGCGAGGTCAATACCAGGAGCACGGCAAGCCGGACTCTGAGCGCCTCCATGATATAGTGACCAATGACAGTCATGGAAACAGCTCACAGATTGAGAGAGACATGGACCACATCTATTATGTCTCCAAAATCTACGGCCCCACGGAAGCTGCAGGCCGGGACCTGTGGATAAACATTGAGCAGATGGACAAAGGAAAGATTCATGGAGAGATTTCCAACACCCACAGACAAGCTTTGAGAGTGAACTTGTCCTTCGAGTTTCCCTACTATGGACATTTACTGAGAGAGATCACCATCACTACAGGCGGCTTCCTCTACACCGGAGGGATCCTCCACAAGATGCTGACAGCCACTCAGTACATCGCTCCACTCATGGCCAACTTTGACCCAAGCATCTCTCCAAACTCCACCATAGTTTACTGTGACAATGgtTCAGCTCTTGTTGTGCAGTGGGATCACGTTTACCTCCAAGACGCCTCACATCTGGGTAGTTTCACCTTCCAGGCTGCTCTACACAGCGATGGCAGGATCACCTTTGCCTACAAAGAGATTCCCACTGACATCAATGAGATCAGTTCAGTGAATCACCCTGTAAAAGTCGGCCTTTCTGATGCTTTTGTGGTGCTTCACAAGATTCAGCAGATTCCTGATGTCCGGAGAAGAACAATATATGAATACCATCGAGTTGAGCTTCTGAAATCCAAGATTACCAACCGCTCCTCCGTTGAGATGCTGCCTCTGCCGACCTGCCTCCAGTTCTCCAGCTGTGACAGCTGCACTACGGCTCACATCGGATTCAACTGTAGCTGGTGCAGCCGCCTTCAGAGATGTTCCAGTGGCTTTGACCGAAATCGACAGGACTGGGTTGACAGCGGATGTCTGGATGAGATGAAGAACCAGAGCTGCAGTCAGACTGCAAATATATCCCAGCACCTCAGTGTAACCATTACACCGCCAATCAATAAAGCTGTGGACGCAGGAACGACAGGGAAGATCTCCAGGTCTAAGGCTTCAGCAAAGCCTACCAGAACCTCCACAACGACCAGAAGTACCAGAACCGGCTCAGCCACAGACTCTTCTCCCAACAGCACCCATACTGAGGATGACACAAACATGGCACTTCATTTGACAGAAGATGGAGGTgagtcattttaaaattattttatccat
>XM_022678031.1
CTTTTGCTGAAAGGACAACCTgaggtggaaaaaaataaatcataaaaaaattactcaaaaacattaaaaatgagcaGCTGTGGTCCAGCCTCCAGTGCAGTCTTTCAGAGATCTTCTGATGTAGTGAGTGCAGCCATGGACGTGAACCTCCACAAAGCACAGAGAGAACCAGGGGCAGAGCCGCCACCGTCCCTCAGACAGGGAGGCCACTCACTGCTCCAAGAGCGAGGTCAATACCAGGAGCACGGCAAGCCGGACTCTGAGCGCCTCCATGATATAGTGACCAATGACAGTCATGGAAACAGCTCACAGATTGAGAGAGACATGGACCACATCTATTATGTCTCCAAAATCTACGGCCCCACGGAAGCTGCAGGCCGGGACCTGTGGATAAACATTGAGCAGATGGACAAAGGAAAGATTCATGGAGAGATTTCCAACACCCACAGACAAGCTTTGAGAGTGAACTTGTCCTTCGAGTTTCCCTACTATGGACATTTACTGAGAGAGATCACCATCACTACAGGCGGCTTCCTCTACACCGGAGGGATCCTCCACAAGATGCTGACAGCCACTCAGTACATCGCTCCACTCATGGCCAACTTTGACCCAAGCATCTCTCCAAACTCCACCATAGTTTACTGTGACAATGgtTCAGCTCTTGTTGTGCAGTGGGATCACGTTTACCTCCAAGACGCCTCACATCTGGGTAGTTTCACCTTCCAGGCTGCTCTACACAGCGATGGCAGGATCACCTTTGCCTACAAAGAGATTCCCACTGACATCAATGAGATCAGTTCAGTGAATCACCCTGTAAAAGTCGGCCTTTCTGATGCTTTTGTGGTGCTTCACAAGATTCAGCAGATTCCTGATGTCCGGAGAAGAACAATATATGAATACCATCGAGTTGAGCTTCTGAAATCCAAGATTACCAACCGCTCCTCCGTTGAGATGCTGCCTCTGCCGACCTGCCTCCAGTTCTCCAGCTGTGACAGCTGCACTACGGCTCACATCGGATTCAACTGTAGCTGGTGCAGCCGCCTTCAGAGATGTTCCAGTGGCTTTGACCGAAATCGACAGGACTGGGTTGACAGCGGATGTCTGGATGAGATGAAGAACCAGAGCTGCAGTCAGACTGCAAATATATCCCAGCACCTCAGTGTAACCATTACACCGCCAATCAATAAAGCTGTGGACGCAGGAACGACAGGGAAGATCTCCAGGTCTAAGGCTTCAGCAAAGCCTACCAGAACCTCCACAACGACCAGAAGTACCAGAACCGGCTCAGCCACAGACTCTTCTCCCAACAGCACCCATACTGAGGATGACACAAACATGGCACTTCATTTGACAGAAGATGGAGGTgagtcattttaaaattattttatccat

Function

GO:

id name namespace
GO:0004690 cyclic nucleotide-dependent protein kinase activity molecular_function
GO:0004692 cGMP-dependent protein kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022678030.1 True 1648 mRNA 0.50 12 11945426 11967009
XM_022678031.1 False 1392 mRNA 0.49 12 11945426 11968401

Neighbor

gene id symbol gene type direction distance location
LOC103027519 NA coding downstream 113162 11819859 ~ 11832264 (-)
trnad-guc_16 NA coding downstream 189827 11755528 ~ 11755599 (-)
rnf182 rnf182 coding downstream 372213 11568053 ~ 11573213 (-)
ranbp9 ranbp9,LOC107556766,LOC107664064 coding downstream 377505 11532828 ~ 11567921 (-)
epdr1 epdr1,LOC107664036,LOC107558964,LOC108437243,LOC108267170,LOC107713986 coding downstream 425389 11514923 ~ 11520037 (-)
LOC103032062 NA coding upstream 6347 11974748 ~ 12050443 (-)
LOC103032996 NA coding upstream 88434 12056835 ~ 12121276 (-)
LOC103028177 LOC108437218 coding upstream 615476 12583877 ~ 12589743 (-)
stam stam,LOC107664071 coding upstream 628419 12596820 ~ 12612107 (-)
LOC103028809 colec12,LOC103028809,LOC108437226,LOC108267818,LOC107686068 coding upstream 649750 12618151 ~ 12703278 (-)
G140883 NA non-coding downstream 3760 11935869 ~ 11941666 (-)
G140882 NA non-coding downstream 14590 11927862 ~ 11930836 (-)
G140815 NA non-coding downstream 102208 11837177 ~ 11843218 (-)
G140825 NA non-coding downstream 108594 11835509 ~ 11836832 (-)
G140823 NA non-coding downstream 126461 11816844 ~ 11818965 (-)
LOC111194201 NA non-coding upstream 3656 11972057 ~ 11974644 (-)
G140897 NA non-coding upstream 85460 12053861 ~ 12054156 (-)
G141000 NA non-coding upstream 298766 12267167 ~ 12267708 (-)
G141013 NA non-coding upstream 365054 12333455 ~ 12335228 (-)
G141024 NA non-coding upstream 410534 12378935 ~ 12381531 (-)
G140772 fam134b other downstream 334897 11606235 ~ 11610529 (-)
G140472 slc4a2,LOC108413474,LOC107718031 other downstream 1430619 10511089 ~ 10514807 (-)
prkci prkci,LOC107668962,LOC107659412,LOC107706387,LOC107738175,LOC107591345 other downstream 1599928 10311097 ~ 10345498 (-)
G140342 NA other downstream 1841969 10035403 ~ 10103457 (-)
LOC103044908 LOC103045223,LOC108413497,LOC105899383 other downstream 2231389 9697155 ~ 9714037 (-)
G140975 NA other upstream 205294 12173695 ~ 12174994 (-)
G141020 NA other upstream 380158 12348559 ~ 12415155 (-)
LOC103027860 cacnb2b,LOC108437228,LOC107664070,LOC107713974,LOC107751551,LOC107585874 other upstream 504403 12472804 ~ 12572147 (-)
G141220 NA other upstream 1347490 13315891 ~ 13316365 (-)
G141255 LOC108413406 other upstream 1468230 13436631 ~ 13438896 (-)

Expression


Co-expression Network