LOC103037989 (puf60,LOC108268151,LOC107598708,LOC107742128,LOC107659444,LOC105889354)


Basic Information

Item Value
gene id LOC103037989
gene name puf60,LOC108268151,LOC107598708,LOC107742128,LOC107659444,LOC105889354
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 14256872 ~ 14269906 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022678045.1
tcctccGCTCCTGCAGGGGCGGCTCTCGCGACGCGTGCTTTCAGAAATACACGCGGAGAAGAAGCGCGAGACTCAAGAGTGCGAGCGGTAACCGAGGACACTGCGCTTGCTTGCTGAGAGGTCCCTGAAAGATTGAGTGCGTGCTTTAGCAGACACTTCCCCACAGCTGTATTAGCCCTGGTCTCCTCAGTAAACAGTGGCCTCATAgAGAGGCAAAGTGCTGAAGATGGAGAATGGTCAAGGCATGGGCTCCAAGCTGGGCCTGCCGCCCCTCACTCCGGAGCAGCAggaagcactgcagagggCAAAGAAATATGCCATGGAGCAGAGCATTAAGAGTGTCCTGGTCAAACAGACAATAGCccaccaacagcagcagctaacaaACCTACAGATGGCAGCAGTGACTATGGGCTTTGGAGATCCTCTCTCACCTTTACAATCGGTGGCAGCACAGAGGCAGCGAGCTCTGGCAATCATGTGTCGAGTCTATGTGGGGTCCATCTATTACGAACTTGGCGAGGACACCATTCGGCAGGCCTTTGCTCCGTTCGGTCCCATCAAGAGCATTGACATGTCCTGGGACTCTGTCACCATGAAGCACAAGGGCTTTGCCTTTGTGGAGTATGAGGTGCCCGAAGCTGCTCAGCTGGCCCTGGAGCAAATGAACTCAGTCATGCTGGGTGGGAGGAACATCAAGGTGGGGCGGCCAGGTAACATCGGACAGGCACAACCCATCATCGACCAATTGGCAGAGGAGGCGCGCGCATACAACCGCATCTATGTAGCCTCAGTGCACCCGGACCTGTCTGATGACGACATCAAGAGCGTCTTCGAGGCCTTTGGGAAGATTAAAAGCTGCATGCTGGCCCGAGAGCCCACCACAGGAAAGCACAAGGGCTACTGCTTTATCGAATATGACAAGCCTCAGTCAGCGGTTGATGCAGTGTCCTCCATGAACCTTTTTGATCTTGGAGGTCAGTACCTGAGGGTTGGGAAGGCTGTGACTCCTCCAATGCCCCTGTTAACCCCCACAACACCTGGAGGTTTGCCTCCTGCTGCAGCTGTTGCGGCTGCAGCTGCCACCGCTAAAATCACAGCTCAGGAGGCATTGGTGACTCCCGCccagctcctcagccagcaAATGGGCCTTCCTCAGGCAGTACTGGCGGCCCAGGCCCCGGGCTTAATTACAGGTGTGACACCTGTTCGACCAACCTTGCCCATGGTTCCTCAGGTAGGCCTGGTAAACCCTGTGCTGGCCTCACCACCGGTCACATCCAGCACATCCACAGGGACACCAACAACCACCACACAACAGCCACCTGCTGAGCCTAAAAAGGAAACTGAAGAGAAGAAGCGGGAGGAGAATGCTGCCTGGGTTGATGGTCTGGGAAAGGAGAGCGCAAATGAACAACAGCCAGTTGGAGGAAGTGGAAGCAAAAATGCAGCCGCACTATCTGGGTCCACAGTAATGGTGTTGCGCAACATGGTGGGACCTGAGGACATCGACGATGACCTGGAGGGGGAAGTGACGGAGGAATGCGGAAAATTTGGCGCTGTGAACCGAGTCATCATCTACCAGGAACGACAGGGGGAAGAGGATGATGCCGAGATCATCGTGAAGATCTTTGTGGAGTTCTCCGACAGTGAAGAAATGAACAAGGCCATTCAGGCCCTTAACAACCGGTGGTTTGCAGGCCGTAAAGTTGTGGCCGAGGTCTACGATCAGCAGCGGTTCAATAATAGTGACCTCTCTGCATAGGACTGTCCCAAAAATGACCACCAGCCCTTTCTTCACCTGCTCAGACTCACTCAGCCTCCATCACTGCTGCTAGAGTTTTGGGCCTCTTTTAAacttgtaattatttttttattgatgtcgataataataatattgggGACAGTCCCTTTGGTGGGATTCGGCTTAGGAAAATGCGCctcatggattttttttttctttgtcatcACCTACTGTGAAagacttgtttattttttatggttAATGTCTGCAGGTTGTTTTCTAATTTGTCCAAATTCAGCTCCCTCACTGCACCCCTGATGCCCTTGTCCAACTACACAAGATacttttccctttctttctgttaggttttttttttttttatgaacagtTTTTACATCACTAATTCTGTTTAGATTCTGAACATTTGTGTTGGAGTCATTGGTTCTGAATTCAATACAATAAATTCTTCAAATATGCCACACATTCTGTTTGTGACTCATGTGCTTGAAATACATTTTGAAGAAATTTGTGATTGATGAAAATGTTGCTAAATATGCTGGAGgcttaaacataaacatttgtCCTCTAGATCAGTTTAAGGATTTGAATTCGCTCTACATCAGccttaattttttaatgatgCAATACAACTAAAGAATTTGTTCACAGGGTTTGTAACCAATAGGAAAGTACTGAACCTAGACGTGggtgtacattttaaaatcacaataGTTTCAAACAATTTTGTTTTATGATTGTGATATGATGCAATATTTGTTTTCCtacatttgaataaataaaaatgagccATGACTGTCCAAATA
>XM_022678046.1
TTAGTTGGCTTAGTTAagCTTGCTTGCTGAGAGGTCCCTGAAAGATTGAGTGCGTGCTTTAGCAGACACTTCCCCACAGCTGTATTAGCCCTGGTCTCCTCAGTAAACAGTGGCCTCATAgAGAGGCAAAGTGCTGAAGATGGAGAATGGTCAAGGCATGGGCTCCAAGCTGGGCCTGCCGCCCCTCACTCCGGAGCAGCAggaagcactgcagagggCAAAGAAATATGCCATGGAGCAGAGCATTAAGAGTGTCCTGGTCAAACAGACAATAGCccaccaacagcagcagctaacaaACCTACAGATGGCAGCAGTGACTATGGGCTTTGGAGATCCTCTCTCACCTTTACAATCGGTGGCAGCACAGAGGCAGCGAGCTCTGGCAATCATGTGTCGAGTCTATGTGGGGTCCATCTATTACGAACTTGGCGAGGACACCATTCGGCAGGCCTTTGCTCCGTTCGGTCCCATCAAGAGCATTGACATGTCCTGGGACTCTGTCACCATGAAGCACAAGGGCTTTGCCTTTGTGGAGTATGAGGTGCCCGAAGCTGCTCAGCTGGCCCTGGAGCAAATGAACTCAGTCATGCTGGGTGGGAGGAACATCAAGGTGGGGCGGCCAGGTAACATCGGACAGGCACAACCCATCATCGACCAATTGGCAGAGGAGGCGCGCGCATACAACCGCATCTATGTAGCCTCAGTGCACCCGGACCTGTCTGATGACGACATCAAGAGCGTCTTCGAGGCCTTTGGGAAGATTAAAAGCTGCATGCTGGCCCGAGAGCCCACCACAGGAAAGCACAAGGGCTACTGCTTTATCGAATATGACAAGCCTCAGTCAGCGGTTGATGCAGTGTCCTCCATGAACCTTTTTGATCTTGGAGGTCAGTACCTGAGGGTTGGGAAGGCTGTGACTCCTCCAATGCCCCTGTTAACCCCCACAACACCTGGAGGTTTGCCTCCTGCTGCAGCTGTTGCGGCTGCAGCTGCCACCGCTAAAATCACAGCTCAGGAGGCATTGGTGACTCCCGCccagctcctcagccagcaAATGGGCCTTCCTCAGGCAGTACTGGCGGCCCAGGCCCCGGGCTTAATTACAGGTGTGACACCTGTTCGACCAACCTTGCCCATGGTTCCTCAGGTAGGCCTGGTAAACCCTGTGCTGGCCTCACCACCGGTCACATCCAGCACATCCACAGGGACACCAACAACCACCACACAACAGCCACCTGCTGAGCCTAAAAAGGAAACTGAAGAGAAGAAGCGGGAGGAGAATGCTGCCTGGGTTGATGGTCTGGGAAAGGAGAGCGCAAATGAACAACAGCCAGTTGGAGGAAGTGGAAGCAAAAATGCAGCCGCACTATCTGGGTCCACAGTAATGGTGTTGCGCAACATGGTGGGACCTGAGGACATCGACGATGACCTGGAGGGGGAAGTGACGGAGGAATGCGGAAAATTTGGCGCTGTGAACCGAGTCATCATCTACCAGGAACGACAGGGGGAAGAGGATGATGCCGAGATCATCGTGAAGATCTTTGTGGAGTTCTCCGACAGTGAAGAAATGAACAAGGCCATTCAGGCCCTTAACAACCGGTGGTTTGCAGGCCGTAAAGTTGTGGCCGAGGTCTACGATCAGCAGCGGTTCAATAATAGTGACCTCTCTGCATAGGACTGTCCCAAAAATGACCACCAGCCCTTTCTTCACCTGCTCAGACTCACTCAGCCTCCATCACTGCTGCTAGAGTTTTGGGCCTCTTTTAAacttgtaattatttttttattgatgtcgataataataatattgggGACAGTCCCTTTGGTGGGATTCGGCTTAGGAAAATGCGCctcatggattttttttttctttgtcatcACCTACTGTGAAagacttgtttattttttatggttAATGTCTGCAGGTTGTTTTCTAATTTGTCCAAATTCAGCTCCCTCACTGCACCCCTGATGCCCTTGTCCAACTACACAAGATacttttccctttctttctgttaggttttttttttttttatgaacagtTTTTACATCACTAATTCTGTTTAGATTCTGAACATTTGTGTTGGAGTCATTGGTTCTGAATTCAATACAATAAATTCTTCAAATATGCCACACATTCTGTTTGTGACTCATGTGCTTGAAATACATTTTGAAGAAATTTGTGATTGATGAAAATGTTGCTAAATATGCTGGAGgcttaaacataaacatttgtCCTCTAGATCAGTTTAAGGATTTGAATTCGCTCTACATCAGccttaattttttaatgatgCAATACAACTAAAGAATTTGTTCACAGGGTTTGTAACCAATAGGAAAGTACTGAACCTAGACGTGggtgtacattttaaaatcacaataGTTTCAAACAATTTTGTTTTATGATTGTGATATGATGCAATATTTGTTTTCCtacatttgaataaataaaaatgagccATGACTGTCCAAATA
>XM_022678047.1
tcctccGCTCCTGCAGGGGCGGCTCTCGCGACGCGTGCTTTCAGAAATACACGCGGAGAAGAAGCGCGAGACTCAAGAGTGCGAGCGGTAACCGAGGACACTGCGCTTGCTTGCTGAGAGGTCCCTGAAAGATTGAGTGCGTGCTTTAGCAGACACTTCCCCACAGCTGTATTAGCCCTGGTCTCCTCAGTAAACAGTGGCCTCATAgAGAGGCAAAGTGCTGAAGATGGAGAATGGTCAAGGCATGGGCTCCAAGCTGGGCCTGCCGCCCCTCACTCCGGAGCAGCAggaagcactgcagagggCAAAGAAATATGCCATGGAGCAGAGCATTAAGAGTGTCCTGGTCAAACAGACAATAGCccaccaacagcagcagctaacaaACCTACAGGTGGCAGCACAGAGGCAGCGAGCTCTGGCAATCATGTGTCGAGTCTATGTGGGGTCCATCTATTACGAACTTGGCGAGGACACCATTCGGCAGGCCTTTGCTCCGTTCGGTCCCATCAAGAGCATTGACATGTCCTGGGACTCTGTCACCATGAAGCACAAGGGCTTTGCCTTTGTGGAGTATGAGGTGCCCGAAGCTGCTCAGCTGGCCCTGGAGCAAATGAACTCAGTCATGCTGGGTGGGAGGAACATCAAGGTGGGGCGGCCAGGTAACATCGGACAGGCACAACCCATCATCGACCAATTGGCAGAGGAGGCGCGCGCATACAACCGCATCTATGTAGCCTCAGTGCACCCGGACCTGTCTGATGACGACATCAAGAGCGTCTTCGAGGCCTTTGGGAAGATTAAAAGCTGCATGCTGGCCCGAGAGCCCACCACAGGAAAGCACAAGGGCTACTGCTTTATCGAATATGACAAGCCTCAGTCAGCGGTTGATGCAGTGTCCTCCATGAACCTTTTTGATCTTGGAGGTCAGTACCTGAGGGTTGGGAAGGCTGTGACTCCTCCAATGCCCCTGTTAACCCCCACAACACCTGGAGGTTTGCCTCCTGCTGCAGCTGTTGCGGCTGCAGCTGCCACCGCTAAAATCACAGCTCAGGAGGCATTGGTGACTCCCGCccagctcctcagccagcaAATGGGCCTTCCTCAGGCAGTACTGGCGGCCCAGGCCCCGGGCTTAATTACAGGTGTGACACCTGTTCGACCAACCTTGCCCATGGTTCCTCAGGTAGGCCTGGTAAACCCTGTGCTGGCCTCACCACCGGTCACATCCAGCACATCCACAGGGACACCAACAACCACCACACAACAGCCACCTGCTGAGCCTAAAAAGGAAACTGAAGAGAAGAAGCGGGAGGAGAATGCTGCCTGGGTTGATGGTCTGGGAAAGGAGAGCGCAAATGAACAACAGCCAGTTGGAGGAAGTGGAAGCAAAAATGCAGCCGCACTATCTGGGTCCACAGTAATGGTGTTGCGCAACATGGTGGGACCTGAGGACATCGACGATGACCTGGAGGGGGAAGTGACGGAGGAATGCGGAAAATTTGGCGCTGTGAACCGAGTCATCATCTACCAGGAACGACAGGGGGAAGAGGATGATGCCGAGATCATCGTGAAGATCTTTGTGGAGTTCTCCGACAGTGAAGAAATGAACAAGGCCATTCAGGCCCTTAACAACCGGTGGTTTGCAGGCCGTAAAGTTGTGGCCGAGGTCTACGATCAGCAGCGGTTCAATAATAGTGACCTCTCTGCATAGGACTGTCCCAAAAATGACCACCAGCCCTTTCTTCACCTGCTCAGACTCACTCAGCCTCCATCACTGCTGCTAGAGTTTTGGGCCTCTTTTAAacttgtaattatttttttattgatgtcgataataataatattgggGACAGTCCCTTTGGTGGGATTCGGCTTAGGAAAATGCGCctcatggattttttttttctttgtcatcACCTACTGTGAAagacttgtttattttttatggttAATGTCTGCAGGTTGTTTTCTAATTTGTCCAAATTCAGCTCCCTCACTGCACCCCTGATGCCCTTGTCCAACTACACAAGATacttttccctttctttctgttaggttttttttttttttatgaacagtTTTTACATCACTAATTCTGTTTAGATTCTGAACATTTGTGTTGGAGTCATTGGTTCTGAATTCAATACAATAAATTCTTCAAATATGCCACACATTCTGTTTGTGACTCATGTGCTTGAAATACATTTTGAAGAAATTTGTGATTGATGAAAATGTTGCTAAATATGCTGGAGgcttaaacataaacatttgtCCTCTAGATCAGTTTAAGGATTTGAATTCGCTCTACATCAGccttaattttttaatgatgCAATACAACTAAAGAATTTGTTCACAGGGTTTGTAACCAATAGGAAAGTACTGAACCTAGACGTGggtgtacattttaaaatcacaataGTTTCAAACAATTTTGTTTTATGATTGTGATATGATGCAATATTTGTTTTCCtacatttgaataaataaaaatgagccATGACTGTCCAAATA
>XM_022678048.1
ATTTTTTCCATTATGTGCGCCTTTTTAGTACTATGACTGTTACCCTTTTTAGACTGATCTATTGGGTCAGATAATCAAAACTGATGACCAGATAATTGCCTCAGCATATTTCAAAAGTAGACAtggcttttttttgttgtgaatgaaatgtgtatgtgtttggTCACCCATTTCATCACAAAGGATGCACAAAGTTGGCAGGCCTCTGAGCCTGGGTTTTGTTATGCATGGCATTGGATTTGGTCTGAGATGTAGGTGAGAGAAGGAATAGGAGAGTATTGTAAACTACAATAGTTGTAAAGCGTGCAGATTTTTCTTAACCatgacattttaatatttcatcATCATTGCATGACTATCAGCACTCAAGGCTCTTTTACACCGGGCTGGGCCTCAAATCTGTGATCACACATTTTGTTGTCATTTTCTTTAACAAGGTGATTCGGTTACACTTTGTGCTGGGCTAATCACCTGGGTGGGTACTAGGGCTGCGTGATATTGGGTTGGGGGAACTGTCATTGCAGTATTTTGCTGTGATTTCAAAATACCAGAATTTTCATCAGAAGCCAGCATGTCATATAAATGATGTCATCAGTGTATTACAGATtggagtgaaataaatgataatgagGAGTTGGAAatgtaatggaaaatgagaacccTGTGAACTTTCCTTTTGTAGCAAGCAGGTTGTAGCATGTCGTTAAAACGATaaattgtgcagccctagtgaaTAGGTAGCCTTAGACTCTTCTTTACATAAACCCCAAATGTGGAGTACATGTAGAAAATTGTACCAGGAGACCCTCCATTGTTTCTTTTGTGATTTGTGTATACTATCAACACTAACACTGCATGAAACATCACCACCACCGTCATCTCACAACCTCCCGAGATTCCTGTATATATTCACGGGTGCTGTTGTGTGATGGGAAATGTACAGATACTCGATCAAGCAGGGTACCACACAGATAGTACCATGCTTGTCCACACTATCCGGTGGAAAAGCCCCTTCAGTGTAGCCACATTCCAGAGCTCATCAATACAGATACACTTTAGGTACGCtgagtgtctttgtgtgtgtttgtgtgttgtgttctgGGTATGTTGGAAATCCATGTCTCCTTTGCAAATATGCTGTAAACTATTAGAGAATCCTTGGTCTTGTGTAAAAGAGGGCTATCAGTCAACACAGCAGTCTAATCAGTCTGATAAAACAGTTACAACTTTTGATTTGGTAGCAAAACTGTCCTAAAGTTTGGCATTGAACACACTGTTTATATGAATTACACTTAAGTTGTGTGGTTTGTGCAGGATCGTCCTTCCTCTTACAGAATACCAGTGTAAGTCCAAAAGCCTTCAAGGAAAACACCTCCGGTTTCAGTTCGTATTATAGTGTTTTGTGCTGGTATGGATTTTGTTGAACTATGTTGACAATCTTGTTGGAATCCATGCAGTCATAACTGTACATGTTTTGAAATGTGTGCTGTGCAGGCCTACAGTAAAACCCCTGAGCTTGCTTCATCACTGTCAAAACTGAACCAAAGGGCTTCTCTGCATCTTCTCAGTTAACTCCCTGGCTAATATGCATAAGTTGTGGCAGCACAGAGGCAGCGAGCTCTGGCAATCATGTGTCGAGTCTATGTGGGGTCCATCTATTACGAACTTGGCGAGGACACCATTCGGCAGGCCTTTGCTCCGTTCGGTCCCATCAAGAGCATTGACATGTCCTGGGACTCTGTCACCATGAAGCACAAGGGCTTTGCCTTTGTGGAGTATGAGGTGCCCGAAGCTGCTCAGCTGGCCCTGGAGCAAATGAACTCAGTCATGCTGGGTGGGAGGAACATCAAGGTGGGGCGGCCAGGTAACATCGGACAGGCACAACCCATCATCGACCAATTGGCAGAGGAGGCGCGCGCATACAACCGCATCTATGTAGCCTCAGTGCACCCGGACCTGTCTGATGACGACATCAAGAGCGTCTTCGAGGCCTTTGGGAAGATTAAAAGCTGCATGCTGGCCCGAGAGCCCACCACAGGAAAGCACAAGGGCTACTGCTTTATCGAATATGACAAGCCTCAGTCAGCGGTTGATGCAGTGTCCTCCATGAACCTTTTTGATCTTGGAGGTCAGTACCTGAGGGTTGGGAAGGCTGTGACTCCTCCAATGCCCCTGTTAACCCCCACAACACCTGGAGGTTTGCCTCCTGCTGCAGCTGTTGCGGCTGCAGCTGCCACCGCTAAAATCACAGCTCAGGAGGCATTGGTGACTCCCGCccagctcctcagccagcaAATGGGCCTTCCTCAGGCAGTACTGGCGGCCCAGGCCCCGGGCTTAATTACAGGTGTGACACCTGTTCGACCAACCTTGCCCATGGTTCCTCAGGTAGGCCTGGTAAACCCTGTGCTGGCCTCACCACCGGTCACATCCAGCACATCCACAGGGACACCAACAACCACCACACAACAGCCACCTGCTGAGCCTAAAAAGGAAACTGAAGAGAAGAAGCGGGAGGAGAATGCTGCCTGGGTTGATGGTCTGGGAAAGGAGAGCGCAAATGAACAACAGCCAGTTGGAGGAAGTGGAAGCAAAAATGCAGCCGCACTATCTGGGTCCACAGTAATGGTGTTGCGCAACATGGTGGGACCTGAGGACATCGACGATGACCTGGAGGGGGAAGTGACGGAGGAATGCGGAAAATTTGGCGCTGTGAACCGAGTCATCATCTACCAGGAACGACAGGGGGAAGAGGATGATGCCGAGATCATCGTGAAGATCTTTGTGGAGTTCTCCGACAGTGAAGAAATGAACAAGGCCATTCAGGCCCTTAACAACCGGTGGTTTGCAGGCCGTAAAGTTGTGGCCGAGGTCTACGATCAGCAGCGGTTCAATAATAGTGACCTCTCTGCATAGGACTGTCCCAAAAATGACCACCAGCCCTTTCTTCACCTGCTCAGACTCACTCAGCCTCCATCACTGCTGCTAGAGTTTTGGGCCTCTTTTAAacttgtaattatttttttattgatgtcgataataataatattgggGACAGTCCCTTTGGTGGGATTCGGCTTAGGAAAATGCGCctcatggattttttttttctttgtcatcACCTACTGTGAAagacttgtttattttttatggttAATGTCTGCAGGTTGTTTTCTAATTTGTCCAAATTCAGCTCCCTCACTGCACCCCTGATGCCCTTGTCCAACTACACAAGATacttttccctttctttctgttaggttttttttttttttatgaacagtTTTTACATCACTAATTCTGTTTAGATTCTGAACATTTGTGTTGGAGTCATTGGTTCTGAATTCAATACAATAAATTCTTCAAATATGCCACACATTCTGTTTGTGACTCATGTGCTTGAAATACATTTTGAAGAAATTTGTGATTGATGAAAATGTTGCTAAATATGCTGGAGgcttaaacataaacatttgtCCTCTAGATCAGTTTAAGGATTTGAATTCGCTCTACATCAGccttaattttttaatgatgCAATACAACTAAAGAATTTGTTCACAGGGTTTGTAACCAATAGGAAAGTACTGAACCTAGACGTGggtgtacattttaaaatcacaataGTTTCAAACAATTTTGTTTTATGATTGTGATATGATGCAATATTTGTTTTCCtacatttgaataaataaaaatgagccATGACTGTCCAAATA

Function

symbol description
puf60 Enables identical protein binding activity. Predicted to be involved in alternative mRNA splicing, via spliceosome; mRNA splice site selection; and regulation of alternative mRNA splicing, via spliceosome. Located in cell junction and nucleoplasm.

NR:

description
PREDICTED: poly(U)-binding-splicing factor PUF60 isoform X3

GO:

id name namespace
GO:0006915 apoptotic process biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0006397 mRNA processing biological_process
GO:0008380 RNA splicing biological_process
GO:0005634 nucleus cellular_component
GO:0003676 nucleic acid binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0003723 RNA binding molecular_function

KEGG:

id description
K12838 PUF60; poly(U)-binding-splicing factor PUF60

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022678045.1 False 2568 mRNA 0.49 12 14256872 14269906
XM_022678046.1 False 2481 mRNA 0.48 12 14257326 14269906
XM_022678047.1 False 2517 mRNA 0.49 11 14256872 14269906
XM_022678048.1 True 3719 mRNA 0.44 8 14261864 14269906

Neighbor

gene id symbol gene type direction distance location
LOC111194316 NA coding upstream 37525 14216110 ~ 14219347 (+)
LOC103035806 ctnnd2,ctnnd2b,LOC107746909 coding upstream 114261 13938285 ~ 14142611 (+)
gpr141 NA coding upstream 338260 13900908 ~ 13918612 (+)
LOC103040707 NA coding upstream 374027 13866287 ~ 13882845 (+)
rgs20 rgs20,LOC108440656 coding upstream 409921 13796394 ~ 13846951 (+)
scrib scrib coding downstream 2923 14272829 ~ 14408400 (+)
LOC103039154 LOC103039154,LOC108440646,LOC108268154 coding downstream 182434 14452340 ~ 14458287 (+)
LOC103039460 LOC108268156 coding downstream 192084 14461990 ~ 14472520 (+)
LOC111194238 NA coding downstream 207648 14477554 ~ 14488421 (+)
LOC103041924 NA coding downstream 218525 14488431 ~ 14500190 (+)
G141467 NA non-coding upstream 20220 14222563 ~ 14236652 (+)
G141459 fam173b,LOC108440663,LOC106941709,LOC107578923 non-coding upstream 42608 14210460 ~ 14214264 (+)
G141415 march6,LOC107686038,LOC107746911,LOC105900596 non-coding upstream 48056 14202989 ~ 14208816 (+)
LOC111194315 NA non-coding upstream 58225 14182044 ~ 14198647 (+)
G141413 NA non-coding upstream 65819 14185207 ~ 14191053 (+)
LOC111194202 NA non-coding downstream 170999 14440905 ~ 14442332 (+)
G141501 NA non-coding downstream 215114 14485020 ~ 14486617 (+)
LOC111194203 NA non-coding downstream 247440 14517346 ~ 14518444 (+)
G141514 NA non-coding downstream 275891 14545797 ~ 14547039 (+)
G141516 NA non-coding downstream 282727 14552633 ~ 14553089 (+)
G141410 NA other upstream 55874 14180665 ~ 14200998 (+)
G141361 tcea1 other upstream 398267 13855603 ~ 13858605 (+)
LOC103029537 adcyap1b,LOC103029537,LOC108437223,LOC107713980 other upstream 1396545 12842798 ~ 12860327 (+)
G141086 NA other upstream 1513419 12741473 ~ 12743453 (+)
G140930 NA other upstream 1875318 12378996 ~ 12381554 (+)
G141495 NA other downstream 258234 14528140 ~ 14530296 (+)
b4gat1 b4gat1,LOC107747893,LOC107745213,LOC107696735 other downstream 509275 14779181 ~ 14784812 (+)
G141740 LOC108440267 other downstream 784751 15054657 ~ 15056973 (+)
G141791 NA other downstream 958804 15228710 ~ 15285457 (+)
G141754 pnp5a,LOC108440276,LOC103368940,LOC107747996,LOC107692836,LOC107728028,LOC108267282,LOC107570765,LOC107703870 other downstream 1115710 15385616 ~ 15401904 (+)

Expression


Co-expression Network