G41904


Basic Information

Item Value
gene id G41904
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 4455497 ~ 4456349 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47590
GTGTTTGAATGGAGCTCATATGTGCACATACATGCTCTAGCAGGCGAGCTAGCCGCGCAGTTCCAATTATAAGAGGGCATATTATTATGTATGCACTAGTCTCATGCATATATGACATTTTTGAACGATTAATGTTTTCTGTACGTTGACAAGCTCTGACTGTCTGTCAGCTTCATTTCCCCGGCGTGCGTCTATTTCACTGGCTAATAATATCGCAAGCCGATTAGATTAGTTTTCCATACTTGCATACTGCATTCGTATCTTTTTTTTTTTGACCAGGGTCACAGGGTGCAGAGTATCATGTATTATTATTTTAGATTTAAATTAGATACATGTACTGCTACAGATCGATATGGTACAATTTACTCTACATTGTAAAATATAGAATGGATAGGAATCAATATGGATTGGCTTGTTTTGTGCAGATTTTGCTTGTTTAAAGTTATTCAAGAGAAATTTGAATCCTGCAATTAAATGAATTCTATGTAATGGGCAGATGCAGACCCTCTGAGACAGGGATAGCTTCAGGTCGGTGTAATGGGGATGCCGAAAGAAGGCTGGCCGAAAGATGAATTGCTACAACAGAAACGTTTCCCCACAACCTGTCAAACAGCTTTCACAACCTATTGTAAAGACCTTTCTGCATGCCACAACCTTTTGGCACGCCCATTACTCCAACTTGCAAATACCCCACACTTGCAACTTATTTGTAATTAGTGAGTTTTAAAGGGACAGTTCACACAATTTATATATATAAATGGTTAGTTCCTGTCCTTGATTCTGATTGGTCAATAGCTGTGTTTTATTCACGATAAAACACGGCTATGAACGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47590 True 833 lncRNA 0.50 2 4455497 4456349

Neighbor

gene id symbol gene type direction distance location
CI01000006_04418319_04451714 CNKSR2B coding upstream 3724 4418319 ~ 4451773 (+)
CI01000006_04386002_04393078 NA coding upstream 62394 4386002 ~ 4393103 (+)
CI01000006_04383784_04384119 MRPS12 coding upstream 71329 4383456 ~ 4384168 (+)
CI01000006_04374883_04381019 NPAS4 coding upstream 74420 4374614 ~ 4381077 (+)
CI01000006_04358978_04367223 EFEMP2B coding upstream 87349 4358978 ~ 4368148 (+)
CI01000006_04467086_04477770 PPME1 coding downstream 10737 4467086 ~ 4477933 (+)
CI01000006_04493236_04507301 ST14B coding downstream 36887 4493236 ~ 4508198 (+)
CI01000006_04509718_04523326 NFRKB coding downstream 53369 4509718 ~ 4523740 (+)
CI01000006_04538991_04543506 RFC2 coding downstream 82642 4538991 ~ 4543604 (+)
CI01000006_04703916_04717922 NA coding downstream 246522 4702871 ~ 4718123 (+)
G41892 NA non-coding upstream 61284 4393714 ~ 4394213 (+)
CI01000006_04349756_04355615 FIBPB, FIBP non-coding upstream 97542 4349453 ~ 4357955 (+)
G41860 NA non-coding upstream 129688 4325572 ~ 4325809 (+)
G41835 NA non-coding upstream 198734 4241522 ~ 4256763 (+)
G41823 NA non-coding upstream 226266 4228837 ~ 4229231 (+)
G41889 NA non-coding downstream 166672 4623021 ~ 4623252 (+)
G41937 NA non-coding downstream 169172 4625521 ~ 4625779 (+)
G41939 NA non-coding downstream 170908 4627257 ~ 4627472 (+)
G41887 NA non-coding downstream 171806 4628155 ~ 4628397 (+)
G41940 NA non-coding downstream 173482 4629831 ~ 4630101 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 719519 3734554 ~ 3736035 (+)
G41591 NA other upstream 1616076 2836167 ~ 2839421 (+)
G41424 NA other upstream 1794927 2645662 ~ 2660570 (+)
G41170 NA other upstream 2759676 1692065 ~ 1695821 (+)
G40768 NA other upstream 3962471 488407 ~ 493026 (+)
G41996 NA other downstream 660857 5117206 ~ 5124149 (+)
G43896 NA other downstream 1313740 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 1652135 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 1665686 6122035 ~ 6122751 (+)
CI01000006_07167131_07168925 NA other downstream 2710440 7166778 ~ 7168925 (+)

Expression


Co-expression Network