LOC111194337 (adcy1)


Basic Information

Item Value
gene id LOC111194337
gene name adcy1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 20611495 ~ 20667477 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022678179.1
CGCACGCGTGATCCGGTCTGAGCCGCGCGCAGCTCGCGCGAGTCTCccagtctctctctatctgtctgtctgtaacacacacacacacgcaggcacacacacacacatacacacacacacgcgcgcgcgagGAATCTCCCTGCGTGCATCTCCTTCCGCGCGCTCCCGGAGACGCTCCCCGCAGGACCCCCTGAAGCCCCCGAAGCCCCCCtcgcccccccacccccccagcCCGCCGGGTTTGGATGGCCGTGCCATGGAGGAGGAGGCTCCGTTCCGGAGGGTCAAGACGCGGCGCAAGCGGAGCCGGTGCCCGCGCGGCGTGCCGCTGCCCGCGATCGCGTGCGAGGACGAGTTCGACTGCAAGGAGCTCGAGGCGCTGTTCCGCGGCTACGGCCTGAAGCTAGAGCAGACCGCCACACTCAAAGCGCTCGCGGTGCTCGTGGCGCTGTCCTGCGCGCTCGCGGCGCTCGAGCTGCTCTCCGGCGGGACCGGCGGCGGCGGTAGCAGCGGCGGGAGCTCCGCCACGGTGGCGCGCGCCTCCCACCCGGTGCACGGCGTGGTGTTCGCCTCGCTCTTCGTCGTCACCAACGTGAAGTACCTGCGCGCGGCGCAGCTGCAGCAGATCGCGCACCTCGCGCTGCTCTTCAGCTTTACCTTCTCGCTCCCGTGCTGCCCGTTCCCGCGCCTCGCGCCCGGCAGCGCCGAGCCGCCCCCCGCGCCGGAGCACGGAGTCTGGCAGCTGATGCTCGTTACCTTCGTGGCCTACGCGCTGCTGCCGGTGCGCACGCTGCTCGCCGTGCTGTTCGGGATAGTGGTGGCCGTGTCTCACACCACGGTCACCGCCACCAGCGTCACCGCCCGCACCCACAAACTCTGGAGAACCATGGTGGCCAACACAGTTCTCTTCACCAGCGTGAACCTGTCGGGTCTGTTTGTGAGGATTCTGACTgagcgcgctcagaggaaagcttTTCTCCAGGCGAGGAACTGCATCGAGGAGCGGCTGCGCATGGAGGACGAGAACGAGAAACAGGAGCGGCTGCTGATGAGTCTCCTGCCCAGGAACGTGGCGATGGAGATGAAGGAAGACTTCCTGAAGCCTCCTGAGAGGATCTTCCACAAGATTTACATCCAGCGGCACGACAACGTCAGcaTCCTGTTTGCGGATATCGTGGGATTCACCAGTCTGGCGTCGCAGTGCACGGCGCAGGAGTTGGTGAAGCTGCTGAACGAACTCTTCGGAAAGTTCGACGAGCTGGCCACGGTGAGTCATTCCCGCTCACACCTCGCTCTGATTGGCCGGCTGCTGTTACCACAGTAACTTAACACCTCCGGG

Function

symbol description
adcy1 Predicted to enable calcium- and calmodulin-responsive adenylate cyclase activity. Predicted to be involved in several processes, including cAMP biosynthetic process; cAMP-mediated signaling; and cellular response to forskolin. Predicted to act upstream of or within axonogenesis and long-term memory. Located in plasma membrane. Implicated in autosomal recessive nonsyndromic deafness 44.

NR:

description
PREDICTED: adenylate cyclase type 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022678179.1 True 1339 mRNA 0.66 4 20611495 20667477

Neighbor

gene id symbol gene type direction distance location
LOC111194338 LOC108440942,LOC108268057 coding upstream 37457 20556766 ~ 20574038 (+)
mep1b LOC108439312 coding upstream 366354 20223776 ~ 20245141 (+)
ripk1 NA coding upstream 496282 20088296 ~ 20115213 (+)
LOC111194335 NA coding upstream 1180321 19425994 ~ 19431174 (+)
LOC103046799 mylk4,LOC107671735,LOC107562868 coding upstream 1491965 19094766 ~ 19119530 (+)
LOC103044091 adcy1,LOC103368946,LOC102227141,LOC107721119 coding downstream 48067 20715544 ~ 20774155 (+)
LOC111194340 NA coding downstream 135823 20803300 ~ 20812844 (+)
LOC103041877 camk2d1,LOC107561529,LOC107730106,LOC107698678,LOC108436151,LOC108267517,LOC107732596 coding downstream 221486 20888963 ~ 21008006 (+)
LOC103043942 LOC108436149 coding downstream 666269 21333746 ~ 21338732 (+)
LOC111194246 LOC108436149,LOC108267579 coding downstream 672103 21339580 ~ 21349632 (+)
LOC111194339 NA non-coding upstream 7139 20599666 ~ 20604356 (+)
G142788 NA non-coding upstream 31122 20576709 ~ 20580373 (+)
G142780 NA non-coding upstream 77438 20533791 ~ 20534057 (+)
G142771 NA non-coding upstream 111742 20423422 ~ 20499753 (+)
G142769 phactr1,LOC108239648,LOC107383912 non-coding upstream 177113 20409623 ~ 20434382 (+)
G142814 NA non-coding downstream 34209 20701686 ~ 20708499 (+)
G142823 NA non-coding downstream 131763 20799240 ~ 20799576 (+)
G142825 NA non-coding downstream 139284 20806761 ~ 20807209 (+)
G142833 NA non-coding downstream 173452 20840929 ~ 20841214 (+)
G142834 NA non-coding downstream 182301 20849778 ~ 20850015 (+)
rnf138 NA other upstream 391346 20202648 ~ 20220149 (+)
G142620 NA other upstream 743203 19736306 ~ 19868292 (+)
G142378 gpaa1 other upstream 1717986 18856236 ~ 18893509 (+)
G142384 gpaa1,LOC102780288 other upstream 1741178 18865450 ~ 18870317 (+)
G142166 LOC108436878 other upstream 3407002 17203222 ~ 17204493 (+)
G142820 NA other downstream 115106 20782583 ~ 20790122 (+)
plag1 plag1,LOC107730125,LOC107698667,LOC107660303,LOC107705642,LOC107570428 other downstream 901605 21569082 ~ 21579724 (+)
LOC103047556 LOC108436107,LOC108267807 other downstream 931205 21598682 ~ 21611682 (+)
G143122 LOC108436138 other downstream 978428 21645905 ~ 21646705 (+)
G143182 mlrn,LOC103039566,LOC106517213,LOC104925296,LOC105008240,LOC106578694 other downstream 1143814 21811291 ~ 21908314 (+)

Expression


Co-expression Network