ndufs2 (ndufs2)


Basic Information

Item Value
gene id ndufs2
gene name ndufs2
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 27100824 ~ 27115844 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022678310.1
AGACGAGCTGAATTTGAAGGCAGTCAGACAGTCCGGCCTGTGAACATGGCGGCGACTATGCTGAGGTCGCTCTCCAAACTCGGACGTCCTTCAGCGGCGATTTTAAACAGCAGCGCTCTGACCCCGAGCTGCGCTGTGCTTCAGAAGAGGCAGAAGCAATGGCAGCCAGATGTGGAGTGGGCAGAGCAGTATGGAGGTGCAGTGATGTATCCTACTTCCATCACTGAAAAATGGGTACCACCACCATGGAACGACAAAGACCCTCCAGCAGAGAAGGAAGTGTCCAACCTCACTATAAACTTTGGTCCCCAGCACCCTGCAGCCCACGGTGTGCTGCGTCTGGTGATGGAGCTGAGCGGCGAGTCGGTGAAGAAGTGTGACCCTCACATCGGCCTGCTTCACCGCGGCACTGAGAAGCTCATAGAGTACAAGACCTATCTGCAGGCACTCCCATACTTCGACAGGCTGGACTATGTCTCCATGATGTGTAATGAGCAGGCCTACTCCCTGGCAGTGGAAAAGTTGCTGAACATCCGGGCTCCACCCCGTGCCGAGTGGATCAGAGTTCTGTATGGAGAGATGACCCGTATTCTGAACCACATCatgggaatcactacacacgcTCTGGACATTGGTGCCATGACCCCCTTCTTCTGGATgtttgaggagagagagaagATGTTTGAGTTCTATGAACGAGTGTCTGGAGCCAGAATGCACGCGGCTTACGTTAGACCTGGAGGAGTTCATCAGgacatGCCTCTGGGTCTTATGGATGATATCTACGAGTGGTGTAAGAACTTCTCGATAAGAATCGATGAAGTGGAGGAGATGCTGACCAACAATCGCATCTGGAAGAACAGAACTATTGGTATTGGGGTTATTGGAGCAGAAGAGGCACTCAACTATGGCTTCAGtGGCGTGATGTTGAGGGGCTCTGGTATTAAGTGGGATCTGAGGAAATCTCAGCCATATGACAAATATGATGAGGTGGAGTTTGACATACCTATTGGAAGTAATGGGGACTGCTATGACAGATATCTGTGTCGAATTGAGGAGATGAGGCAGTCTTTAAGAATCATGCACCAGTGTCTCAACAAGATGCCTGAAGGAGAAATCAAGGTGGATGACGCCAAGGTCGCACCCCCCAAGAGATCTGAGATGAAGATGTCGATGGAGTCATTGATTCATCATTTTAAGCTCTACACAGAGGGTTACCAGGTGCCTCCAGGCGCCACATACACAGCTGTTGAAGCACCAAAGGGTGAGTTTGGGGTATACCTGGTCTCTGATGGTTCCAGCAGACCCTACCGCTGCAAGATCAAAGCTCCAGGCTTTGCTCATTTGGCCGGTCTGGATAAAATGTCTCAGGGACACATGCTTGCTGACGTCGTGGCCATCATCGGCACTCAGGACATTGTGTTCGGTGAGGTGGACCGTTAGTGAGCTGTAGTGACTGACTGGCTTGTGTTCAACCATTTAGTTCTGTCGTTCAAACTCACTCTGCTAATGCTATGATTGACAACTTCAGTCAAGCCTTTCTATGTATAAAAGCTTAttaaacttaataaatattttaagtgtgA

Function

symbol description
ndufs2 Predicted to enable NADH dehydrogenase (ubiquinone) activity. Predicted to be involved in mitochondrial electron transport, NADH to ubiquinone. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in Leigh disease; hypertrophic cardiomyopathy; inherited metabolic disorder; multiple sclerosis; and nuclear type mitochondrial complex I deficiency 6. Orthologous to human NDUFS2 (NADH:ubiquinone oxidoreductase core subunit S2).

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0051287 NAD binding molecular_function
GO:0048038 quinone binding molecular_function
GO:0016651 oxidoreductase activity, acting on NAD(P)H molecular_function

KEGG:

id description
K03935 NDUFS2; NADH dehydrogenase (ubiquinone) Fe-S protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022678310.1 True 1586 mRNA 0.50 14 27100824 27115844

Neighbor

gene id symbol gene type direction distance location
focad focad,LOC101469292,LOC104964325 coding upstream 65745 26935083 ~ 27035079 (+)
rpl34 rpl34,LOC107566275,LOC107681344,LOC107573163 coding upstream 493633 26602015 ~ 26607191 (+)
etnppl etnppl coding upstream 633004 26448792 ~ 26467820 (+)
col25a1 col25a1,LOC102793499 coding upstream 655846 26116456 ~ 26444978 (+)
saxo1 NA coding upstream 1296439 25801919 ~ 25804385 (+)
LOC111194356 NA coding downstream 132507 27248351 ~ 27251123 (+)
LOC111194351 NA coding downstream 186022 27301866 ~ 27305675 (+)
adgra3 adgra3,LOC107691845 coding downstream 914913 28030757 ~ 28084025 (+)
LOC103045778 kcnip4,LOC100711851,LOC102215477 coding downstream 1183652 28299496 ~ 28368962 (+)
LOC103035875 LOC108437090 coding downstream 1295469 28411313 ~ 28445089 (+)
G144617 NA non-coding upstream 283497 26817035 ~ 26817327 (+)
G144611 NA non-coding upstream 298803 26798916 ~ 26802021 (+)
G144608 trmt10a non-coding upstream 315060 26783243 ~ 26785764 (+)
G144573 NA non-coding upstream 379667 26720432 ~ 26721157 (+)
G144553 NA non-coding upstream 492140 26608211 ~ 26608684 (+)
LOC111194210 NA non-coding downstream 136514 27252358 ~ 27255652 (+)
G144686 NA non-coding downstream 146406 27262250 ~ 27263283 (+)
G144684 NA non-coding downstream 181601 27297445 ~ 27300088 (+)
LOC111194352 NA non-coding downstream 319969 27435813 ~ 27438301 (+)
G144782 NA non-coding downstream 321232 27437076 ~ 27439508 (+)
G144613 NA other upstream 288697 26807716 ~ 26812127 (+)
G144584 NA other upstream 346382 26750835 ~ 26754442 (+)
G144372 NA other upstream 1311982 25786737 ~ 25788842 (+)
G144333 NA other upstream 1446574 25653006 ~ 25654250 (+)
G144290 NA other upstream 1626130 25472123 ~ 25474694 (+)
G144671 NA other downstream 90898 27206742 ~ 27208591 (+)
LOC103038323 tspan5a,LOC108437089,LOC103038323,LOC107740922,LOC107561515,LOC107691852,LOC107659128 other downstream 1510200 28626044 ~ 28658921 (+)
LOC103041452 ap1s1,LOC107666294,LOC105921790,LOC107593725,LOC103148860,LOC108443977 other downstream 2039881 29155725 ~ 29170570 (+)
LOC111194370 LOC108434654 other downstream 2313181 29429025 ~ 29432026 (+)
G145438 NA other downstream 3062360 30178204 ~ 30178724 (+)

Expression


Co-expression Network