dthd1


Basic Information

Item Value
gene id dthd1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 34012482 ~ 34025373 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022678439.1
AAGCATTTGTGTTGTGTTAATATATGCATGTAATTACTTGCAAATGTTAGTTTTAGATAATGCATGCGTGGCTAcgtaagtgtttgtgtgtgcgtaaTAGCGGACAGTAAAAGTGGAATGTCTGAAGAGGGCTGAATAGCTCCTTATTGTTCAGCCCAGCAGAGAAGCGGCcattcatacaaaaaaaaaagcacattacTCTTCTTTAGGGTCCTCAGTTGCTAAGGGCCCCTCGTTGTCTTCAGGCACACCCTTTATTGCCATGGCCACTCGTCTTTACACTGCCAGATTTGTAAATACTGCCAGGGCTGGACAAAGGCAGAAGCTAGCCCACAAACTGCACTACAGACCTACTGCACTACAGACCTAGAGCCAGATCAGAACCACAGACAGTCGCTGCTGGCAGGGTTAACTCACATTAACCGCATTAACAACTGCAGCTTGTGATCAAAAGGCCTTCTGACTGTCTgattcagaatgctgggggaaGATTTTGGATTTGGCTCAAGTCCTGAAGATAAACTTCTGAGCCTGCTGCAAGATACAACCCAGAAACTACAGGCACTGTTACACTCAGGAACAACCATAAGTGCAGAGGAACCTGGGCCTGAACTTGCGAAGGAAGACTCAGCAAGGCTTCTTAAGAAGCTTTTTCAGCTCTTTAAGGATTGGAGTGTGCTGCACACGCACAGGGTAAGACTCCTGAGGGAAGAACTGAACGTGacagcacacacactgacagagcaagagagaaaaccAAATACTATTGAAAGAGACTCTCAAATATCAACAAACATCGGCGTCTCCAGGGAGTCTAATCTTCACAAGCATGCCTACATCACTGACGTCATTCTGAACGTGCTGGAAGACGTGCAAAATATTGAGAAGAAACTGCATTCAGTCACAAGCAAACTTGAGAGAGCAATCAGTGTTCTCTCTAAAACTAAGCTAGACTTTAAGGAAGCTAGGCAAGACAACCTGGTCCTTCCACAAACATCTTCTGAACAGCCATGTGTTCCTCAAGAATTGATTCCAGATGATATTTCCACTGTATCACAGGAATGTGACCTTCAAACTACCCCAGACCCCAGAAAGAATAGACACCATGACTTAAGTGACTCATCTAATGAATGCAGAATTGTTCCTGTAAGAGGAGTAGATGCACAGAAAGAGAATAATGTTCAGAATGATAGTGAACTGGTAAAGAATGCAGGAACAGATGTCCACAAAGTTCACCTTGAGGCTGTTAATGATGGAGAGATGACTAAAGAACCAGTGGATGAAGTGATTGAAGAAAGAGGGAATATAGAGAAAAGTGATAAAGGAGGCAGACCACTAATGCAATCTTCTGATTGTGTGAGCCAGACACAAGACTTGGCAACAGTAAGTTTAACAGACTCAGGCAGTTCTTCCTCCAAACCGGTCTGCTACATCACCGGCCCAGTGAAAGTTGCAAAGCTCATCACCTGTAAGGTTGTGGATGGCCTCAGCTCCCTCATGGTGTCTGGATCAGAGGAGTTGGTGAGCAGCGTGCTCAGGATTGAAATCCCCAGCAGCACCAAAAGTCCCTTATTCCCATTATCCATAGCTATGCCTTTTCGAGCATCTTATCGTGGGAACTACCGTGAGGTCACGGTGAAGGTGGTGGACCAGGAACAGAGGGTCAGCTACGTCTCTCCTATAGCCACAGAAAGCAGCTATGAAGGTCACAGGGGTTCATTTGCAGTGGTGCGAGTTTACACCCTTGGTGTATTTGCAGTTGTGTCCCGTTTGCAGAGGGAGACTTTCACCATCCCAAAGAGAGGGATCTCTGTCAAGCTCACTGTGGATCCCAGAATATGCCTGGATTACTCGCCTGGATCTTTCACTACACCAGTTGTTGCCCAAGCAATGGTGCAGCCAGTAGATGCCATACTGCTGAATTCACTGAAGTCCTGGAATGATTCCTATCGCTCCATCCTCACCACTAGCCCTCTACTTTACCTCAATCACCCTTCAACCTTATCCTTCAGACGACCTGTGACCATAACCCTGCCCTGTCCTCCCAACCCTGACAAGAGGAAAACAGGAGAAGAtaacactccacaccacactcGTCCCAACAGCAAAGCACTTAGGCCTGATACTTTCCCACCCTGTCAAATCAGAGTTTTGAGTGCTTCACTCAAGTCATCCAGAGAGCTGTGTAAAGAGCAGCTGGCTGTATTGGGCTGGAGAGATGAGCAGTGGAATGTTCTTGATCAGATCAGTGTGAGGAACCTCCAGAATGGCCTGGTCTCTTTTGATCTAACGGACAACTGTGAGCGACTGATAGTCCTTCGTCTGCTCTCCTCGATAAGACCACCCTGCCTGACTTTCTTCGCTCAAGACCTGGAGGAGTCAGTAAGGACTTGTGCTGTAACTGTCGTCCTCCACACCAAGCGAGAGGACCCCAGCAATGCAATCCTGGCTGCCCATCCCAGCAGAGATCTGAGCTGGGCACTGAATGAATTTCGGGCCCAGGCTTATTTTGGGCCTCCAGAGCCCTCCACTGAGTTCTCCATGAGGGAGGGAGATCAGCTACTGCTGAAATTCAGCGGGAACATTACCAGTGCAGCAGGTGACCAGGGCACAGCgccacacacagtcacactccACATTCAGAGACGGAACTGGCTCTGCCTGAAGCTGAAGGAACAAGACCCATTTGGAAACTACAGCTCACCTCATTACAAAGGCACAGCCATTCTCTTCCGTATCCCCAGAGATCAGCTGGTCTGGAGAGGAGACCAAGCGGTCATATCTGAAGATTACAAATTAGAGGCACCAGTCTGCAAGCTGTCACTCACTCTCCCAAAGACTGTGAAAACTCTCAACAGACCAATGAGTGCAAAAGTCTTACGGCATGACCAGAGAGAGCTGCTGTGTGATGAGCTGTTAGCCTGGCTCTCGGGTGAGCTGTCTGAAGAGGATGCTGCATTACTGGTCATGTGTCTTCGCCTGCGCCGCTCAACCGTCCAGCTGGCCCGACTCCGAGCCCCGGACAGCCTCTCTCTGCAGACCTTCAACATCCTGTCCACCTGGAGGCGCAGCCTGCCCTCCTCTACACCAAAACGCCCTCTGCTGGCACGCTGTCTGACCCACATTGGCAGACCGGAGCTGGCTGCAGAGCTGCTGAGGAGAGGCCCAGCTGTGGATGAAGGGGAGAGGAAACATGTTGAACCATGGAGATTCAAAACACTGAGGAGATCCGTAACAAGCCATGGAACTTTAAGGCAATCCATCACATTGGAGTGAAGCAGGATTTGAAAAAGATGATAAAAACAGAATGTTCTGTGAAGGTAGCAACCCATGATAGTCCACTGACATTCATGTAAAGCAATGAGGTAGATAATtcagcaaaaacacacaaaaaaggcacaacaaatacagaaaagtctcattaaaaaaataaaacagagtaGCA
>XM_022678440.1
AAGCATTTGTGTTGTGTTAATATATGCATGTAATTACTTGCAAATGTTAGTTTTAGATAATGCATGCGTGGCTAcgtaagtgtttgtgtgtgcgtaaTAGCGGACAGTAAAAGTGGAATGTCTGAAGAGGGCTGAATAGCTCCTTATTGTTCAGCCCAGCAGAGAAGCGGCcattcatacaaaaaaaaaagcacattacTCTTCTTTAGGGTCCTCAGTTGCTAAGGGCCCCTCGTTGTCTTCAGGCACACCCTTTATTGCCATGGCCACTCGTCTTTACACTGCCAGATTTGTAAATACTGCCAGGGCTGGACAAAGGCAGAAGCTAGCCCACAAACTGCACTACAGACCTACTGCACTACAGACCTAGAGCCAGATCAGAACCACAGACAGTCGCTGCTGGCAGGGTTAACTCACATTAACCGCATTAACAACTGCAGCTTGTGATCAAAAGGCCTTCTGACTGTCTgattcagaatgctgggggaaGATTTTGGATTTGGCTCAAGTCCTGAAGATAAACTTCTGAGCCTGCTGCAAGATACAACCCAGAAACTACAGGCACTGTTACACTCAGGAACAACCATAAGTGCAGAGGAACCTGGGCCTGAACTTGCGAAGGAAGACTCAGCAAGGCTTCTTAAGAAGCTTTTTCAGCTCTTTAAGGATTGGAGTGTGCTGCACACGCACAGGGTAAGACTCCTGAGGGAAGAACTGAACGTGacagcacacacactgacagagcaagagagaaaaccAAATACTATTGAAAGAGACTCTCAAATATCAACAAACATCGGCGTCTCCAGGGAGTCTAATCTTCACAAGCATGCCTACATCACTGACGTCATTCTGAACGTGCTGGAAGACGTGCAAAATATTGAGAAGAAACTGCATTCAGTCACAAGCAAACTTGAGAGAGCAATCAGTGTTCTCTCTAAAACTAAGCTAGACTTTAAGGAAGCTAGGCAAGACAACCTGGTCCTTCCACAAACATCTTCTGAACAGCCATGTGTTCCTCAAGAATTGATTCCAGATGATATTTCCACTGTATCACAGGAATGTGACCTTCAAACTACCCCAGACCCCAGAAAGAATAGACACCATGACTTAAGTGACTCATCTAATGAATGCAGAATTGTTCCTGTAAGAGGAGTAGATGCACAGAAAGAGAATAATGTTCAGAATGATAGTGAACTGGTAAAGAATGCAGGAACAGATGTCCACAAAGTTCACCTTGAGGCTGTTAATGATGGAGAGATGACTAAAGAACCAGTGGATGAAGTGATTGAAGAAAGAGGGAATATAGAGAAAAGTGATAAAGGAGGCAGACCACTAATGCAATCTTCTGATTGTGTGAGCCAGACACAAGACTTGGCAACAGTAAGTTTAACAGACTCAGGCAGTTCTTCCTCCAAACCGGTCTGCTACATCACCGGCCCAGTGAAAGTTGCAAAGCTCATCACCTGTAAGGTTGTGGATGGCCTCAGCTCCCTCATGGTGTCTGGATCAGAGGAGTTGGTGAGCAGCGTGCTCAGGATTGAAATCCCCAGCAGCACCAAAAGTCCCTTATTCCCATTATCCATAGCTATGCCTTTTCGAGCATCTTATCGTGGGAACTACCGTGAGGTCACGGTGAAGGTGGTGGACCAGGAACAGAGGGTCAGCTACGTCTCTCCTATAGCCACAGAAAGCAGCTATGAAGGTCACAGGGGTTCATTTGCAGTGGTGCGAGTTTACACCCTTGGTGTATTTGCAGTTGTGTCCCGTTTGCAGAGGGAGACTTTCACCATCCCAAAGAGAGGGATCTCTGTCAAGCTCACTGTGGATCCCAGAATATGCCTGGATTACTCGCCTGGATCTTTCACTACACCAGTTGTTGCCCAAGCAATGGTGCAGCCAGTAGATGCCATACTGCTGAATTCACTGAAGTCCTGGAATGATTCCTATCGCTCCATCCTCACCACTAGCCCTCTACTTTACCTCAATCACCCTTCAACCTTATCCTTCAGACGACCTGTGACCATAACCCTGCCCTGTCCTCCCAACCCTGACAAGAGGAAAACAGGAGAAGAtaacactccacaccacactcGTCCCAACAGCAAAGCACTTAGGCCTGATACTTTCCCACCCTGTCAAATCAGAGTTTTGAGTGCTTCACTCAAGTCATCCAGAGAGCTGTGTAAAGAGCAGCTGGCTGTATTGGGCTGGAGAGATGAGCAGTGGAATGTTCTTGATCAGATCAGTGTGAGGAACCTCCAGAATGGCCTGGTCTCTTTTGATCTAACGGACAACTGTGAGCGACTGATAGTCCTTCGTCTGCTCTCCTCGATAAGACCACCCTGCCTGACTTTCTTCGCTCAAGACCTGGAGGAGTCAGTAAGGACTTGTGCTGTAACTGTCGTCCTCCACACCAAGCGAGAGGACCCCAGCAATGCAATCCTGGCTGCCCATCCCAGCAGAGATCTGAGCTGGGCACTGAATGAATTTCGGGCCCAGGCTTATTTTGGGCCTCCAGAGCCCTCCACTGAGTTCTCCATGAGGGAGGGAGATCAGCTACTGCTGAAATTCAGCGGGAACATTACCAGTGCAGGTGACCAGGGCACAGCgccacacacagtcacactccACATTCAGAGACGGAACTGGCTCTGCCTGAAGCTGAAGGAACAAGACCCATTTGGAAACTACAGCTCACCTCATTACAAAGGCACAGCCATTCTCTTCCGTATCCCCAGAGATCAGCTGGTCTGGAGAGGAGACCAAGCGGTCATATCTGAAGATTACAAATTAGAGGCACCAGTCTGCAAGCTGTCACTCACTCTCCCAAAGACTGTGAAAACTCTCAACAGACCAATGAGTGCAAAAGTCTTACGGCATGACCAGAGAGAGCTGCTGTGTGATGAGCTGTTAGCCTGGCTCTCGGGTGAGCTGTCTGAAGAGGATGCTGCATTACTGGTCATGTGTCTTCGCCTGCGCCGCTCAACCGTCCAGCTGGCCCGACTCCGAGCCCCGGACAGCCTCTCTCTGCAGACCTTCAACATCCTGTCCACCTGGAGGCGCAGCCTGCCCTCCTCTACACCAAAACGCCCTCTGCTGGCACGCTGTCTGACCCACATTGGCAGACCGGAGCTGGCTGCAGAGCTGCTGAGGAGAGGCCCAGCTGTGGATGAAGGGGAGAGGAAACATGTTGAACCATGGAGATTCAAAACACTGAGGAGATCCGTAACAAGCCATGGAACTTTAAGGCAATCCATCACATTGGAGTGAAGCAGGATTTGAAAAAGATGATAAAAACAGAATGTTCTGTGAAGGTAGCAACCCATGATAGTCCACTGACATTCATGTAAAGCAATGAGGTAGATAATtcagcaaaaacacacaaaaaaggcacaacaaatacagaaaagtctcattaaaaaaataaaacagagtaGCA
>XM_022678441.1
caggcagggagacgaggaggcggacgtaaaagcagGCGTCTCCAGGGAGTCTAATCTTCACAAGCATGCCTACATCACTGACGTCATTCTGAACGTGCTGGAAGACGTGCAAAATATTGAGAAGAAACTGCATTCAGTCACAAGCAAACTTGAGAGAGCAATCAGTGTTCTCTCTAAAACTAAGCTAGACTTTAAGGAAGCTAGGCAAGACAACCTGGTCCTTCCACAAACATCTTCTGAACAGCCATGTGTTCCTCAAGAATTGATTCCAGATGATATTTCCACTGTATCACAGGAATGTGACCTTCAAACTACCCCAGACCCCAGAAAGAATAGACACCATGACTTAAGTGACTCATCTAATGAATGCAGAATTGTTCCTGTAAGAGGAGTAGATGCACAGAAAGAGAATAATGTTCAGAATGATAGTGAACTGGTAAAGAATGCAGGAACAGATGTCCACAAAGTTCACCTTGAGGCTGTTAATGATGGAGAGATGACTAAAGAACCAGTGGATGAAGTGATTGAAGAAAGAGGGAATATAGAGAAAAGTGATAAAGGAGGCAGACCACTAATGCAATCTTCTGATTGTGTGAGCCAGACACAAGACTTGGCAACAGTAAGTTTAACAGACTCAGGCAGTTCTTCCTCCAAACCGGTCTGCTACATCACCGGCCCAGTGAAAGTTGCAAAGCTCATCACCTGTAAGGTTGTGGATGGCCTCAGCTCCCTCATGGTGTCTGGATCAGAGGAGTTGGTGAGCAGCGTGCTCAGGATTGAAATCCCCAGCAGCACCAAAAGTCCCTTATTCCCATTATCCATAGCTATGCCTTTTCGAGCATCTTATCGTGGGAACTACCGTGAGGTCACGGTGAAGGTGGTGGACCAGGAACAGAGGGTCAGCTACGTCTCTCCTATAGCCACAGAAAGCAGCTATGAAGGTCACAGGGGTTCATTTGCAGTGGTGCGAGTTTACACCCTTGGTGTATTTGCAGTTGTGTCCCGTTTGCAGAGGGAGACTTTCACCATCCCAAAGAGAGGGATCTCTGTCAAGCTCACTGTGGATCCCAGAATATGCCTGGATTACTCGCCTGGATCTTTCACTACACCAGTTGTTGCCCAAGCAATGGTGCAGCCAGTAGATGCCATACTGCTGAATTCACTGAAGTCCTGGAATGATTCCTATCGCTCCATCCTCACCACTAGCCCTCTACTTTACCTCAATCACCCTTCAACCTTATCCTTCAGACGACCTGTGACCATAACCCTGCCCTGTCCTCCCAACCCTGACAAGAGGAAAACAGGAGAAGAtaacactccacaccacactcGTCCCAACAGCAAAGCACTTAGGCCTGATACTTTCCCACCCTGTCAAATCAGAGTTTTGAGTGCTTCACTCAAGTCATCCAGAGAGCTGTGTAAAGAGCAGCTGGCTGTATTGGGCTGGAGAGATGAGCAGTGGAATGTTCTTGATCAGATCAGTGTGAGGAACCTCCAGAATGGCCTGGTCTCTTTTGATCTAACGGACAACTGTGAGCGACTGATAGTCCTTCGTCTGCTCTCCTCGATAAGACCACCCTGCCTGACTTTCTTCGCTCAAGACCTGGAGGAGTCAGTAAGGACTTGTGCTGTAACTGTCGTCCTCCACACCAAGCGAGAGGACCCCAGCAATGCAATCCTGGCTGCCCATCCCAGCAGAGATCTGAGCTGGGCACTGAATGAATTTCGGGCCCAGGCTTATTTTGGGCCTCCAGAGCCCTCCACTGAGTTCTCCATGAGGGAGGGAGATCAGCTACTGCTGAAATTCAGCGGGAACATTACCAGTGCAGCAGGTGACCAGGGCACAGCgccacacacagtcacactccACATTCAGAGACGGAACTGGCTCTGCCTGAAGCTGAAGGAACAAGACCCATTTGGAAACTACAGCTCACCTCATTACAAAGGCACAGCCATTCTCTTCCGTATCCCCAGAGATCAGCTGGTCTGGAGAGGAGACCAAGCGGTCATATCTGAAGATTACAAATTAGAGGCACCAGTCTGCAAGCTGTCACTCACTCTCCCAAAGACTGTGAAAACTCTCAACAGACCAATGAGTGCAAAAGTCTTACGGCATGACCAGAGAGAGCTGCTGTGTGATGAGCTGTTAGCCTGGCTCTCGGGTGAGCTGTCTGAAGAGGATGCTGCATTACTGGTCATGTGTCTTCGCCTGCGCCGCTCAACCGTCCAGCTGGCCCGACTCCGAGCCCCGGACAGCCTCTCTCTGCAGACCTTCAACATCCTGTCCACCTGGAGGCGCAGCCTGCCCTCCTCTACACCAAAACGCCCTCTGCTGGCACGCTGTCTGACCCACATTGGCAGACCGGAGCTGGCTGCAGAGCTGCTGAGGAGAGGCCCAGCTGTGGATGAAGGGGAGAGGAAACATGTTGAACCATGGAGATTCAAAACACTGAGGAGATCCGTAACAAGCCATGGAACTTTAAGGCAATCCATCACATTGGAGTGAAGCAGGATTTGAAAAAGATGATAAAAACAGAATGTTCTGTGAAGGTAGCAACCCATGATAGTCCACTGACATTCATGTAAAGCAATGAGGTAGATAATtcagcaaaaacacacaaaaaaggcacaacaaatacagaaaagtctcattaaaaaaataaaacagagtaGCA

Function

NR:

description
PREDICTED: death domain-containing protein 1

GO: NA

KEGG:

id description
ko03440 Homologous recombination

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022678439.1 True 3445 mRNA 0.48 10 34014472 34025373
XM_022678440.1 False 3442 mRNA 0.48 10 34014472 34025373
XM_022678441.1 False 2681 mRNA 0.49 10 34012482 34025373

Neighbor

gene id symbol gene type direction distance location
stim2 stim2,LOC107707336,LOC107661953,LOC107684943,LOC107757910 coding upstream 2009999 31934723 ~ 32002483 (+)
rbpj rbpj,rbpjb,LOC107597867,LOC107707427,LOC107549731 coding upstream 2152825 31773504 ~ 31859657 (+)
LOC103032447 LOC108428553,LOC106608959,LOC103364796 coding upstream 2304527 31684228 ~ 31707955 (+)
LOC103032972 LOC103032972 coding upstream 2342353 31666799 ~ 31670129 (+)
acox3 acox3 coding upstream 2392950 31597346 ~ 31619532 (+)
LOC103033595 per1b,per1,LOC108428562,LOC107711564,LOC107684947,LOC107557521,LOC107677837 coding downstream 3077 34028450 ~ 34061967 (+)
LOC103032728 lrch4,LOC108428567,LOC107661958 coding downstream 89768 34115141 ~ 34170245 (+)
LOC103039994 NA coding downstream 164261 34189634 ~ 34191960 (+)
rwdd4 rwdd4 coding downstream 351349 34376722 ~ 34383744 (+)
LOC103032224 LOC107583291 coding downstream 359957 34385330 ~ 34423139 (+)
G146243 NA non-coding upstream 108193 33882808 ~ 33904289 (+)
G146241 arap2 non-coding upstream 154174 33851013 ~ 33858308 (+)
G146237 NA non-coding upstream 189281 33821431 ~ 33823201 (+)
G146231 NA non-coding upstream 278680 33733540 ~ 33733802 (+)
G146226 NA non-coding upstream 315136 33697108 ~ 33697346 (+)
G146265 NA non-coding downstream 3953 34029326 ~ 34065509 (+)
G146269 NA non-coding downstream 50831 34076204 ~ 34201199 (+)
G146284 NA non-coding downstream 154885 34180258 ~ 34212243 (+)
G146296 NA non-coding downstream 183769 34209142 ~ 34211321 (+)
G146424 NA non-coding downstream 563594 34588967 ~ 34589166 (+)
pcdh7 pcdh7,LOC107568147,LOC107684944,LOC107561555,LOC107681559,LOC107753999 other upstream 908253 32879690 ~ 33104229 (+)
G146104 NA other upstream 1399920 32612125 ~ 32612562 (+)
trnae-uuc_22 NA other upstream 1940919 32071314 ~ 32071563 (+)
tbc1d19 tbc1d19,LOC107660707 other upstream 2085932 31892526 ~ 31926550 (+)
smim20 NA other upstream 2293431 31717142 ~ 31719051 (+)
LOC103033902 pcolce2,pcolceb,LOC108428564,LOC107711558,LOC107557504,LOC107677833,LOC107750313 other downstream 42208 34067581 ~ 34077975 (+)
cct7 cct7,LOC107697251,LOC107721663,LOC107583281,LOC107744273,LOC107691460,LOC107571935,LOC102781788 other downstream 1374405 35399778 ~ 35406330 (+)
G146805 acadvl,LOC107731915,LOC107595296,LOC107675499 other downstream 2466139 36491512 ~ 36494457 (+)
acap1 acap1,LOC107595305,LOC107731905,LOC107683535,LOC107675497 other downstream 2665320 36690693 ~ 36719287 (+)
c16h4orf48 cunh4orf48 other downstream 3013562 37038935 ~ 37042227 (+)

Expression


Co-expression Network