ankrd53


Basic Information

Item Value
gene id ankrd53
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 40785512 ~ 40792759 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022678558.1
TTGCCAGGCAACAGAGAAATCCGTCAACAGACAGTTCATGGCAGAGGCTGGCAGTGGGACTCGTCGTAAGGTGCGCTGGCTGCAGAGAGCGCCGCCCGCAGGTGATTTATTCCAGGCCGCGGTGTCCGGAGATCAGGAATGGCTGAGCTTCAGTCTGAGGAGAACACTCTCACCCTCACAGCCCAACAAACAGggtCTCACAGTGCTCCATGTGGCTGCTCAGCATGGCCGGCTCGACTGCGTAAAGCTGCTTGTGGAGGCTTACTGTGTTGATGTGAACGCTAGCTGTCCGTGTGGGCGGAGACCCCTGCACATGGTGCTCAGTCCACAGAGCAAACCCCACTCACACACCTGCATTATATACCTGCTGCAGCACGGAGCCCAGCACAACGTATCCACAGATGAAGGACTGACCCCTCTGCATATGGCTGCAGCTGAAGGCCTGAAAAACTGTGTTGAAACGCTGGTTGAGGTTGGAGCAGACACACATGCCATTGACAAACACGGACACACACCACTCGACCTCGCTCGCTTATGGGGTCACAGGGTCATTGCCAGGTTTCTAAAGAATGCCATGTGGCAGAGAGATAAGAAGAAAGAAATGGAGGAACGTAAAGCTCTGCAGAATCTCCGGCACAATCTGATGTGGCTGTACAGGACTGCAGAGAGCAAGGAAAAGGTGACCAGAGAGGCGGTTAATGTGCAGAAGGTCACTGAGTGGGCTGAGAAGAAAGGGCTTCCTTTGCTCTGGCCTCCTCTCAGGAGCTCAGGAGCTTTAAACCATAGCTGCTTCCCATCCACTGAGCCTCCGATTACAAAGAGCAAAAAGAAATTCAAGGAAAGTTCACCCACACCAATGTGGGACATCTCTCCAAACCCCTGTAGACCTCCTCCAGCCAGTGTCAGCAGACCACAGGAGGTACGAATGGGAGTCCATCCAGAGAAAGCTCCACTAGAGCCAGATCTACGTAATAGAGTGACTTTGAGTTGTTTTGAGGATGGCCGCATCCACTACACTGCATCATGGGAGAACATTCCACAGTCAGTTCCTGCCCTGCCCATGGATGTCATCCAAAGAGGCCTGTTTCCATCTGCTTTTCCCTCCCGTATCACTTCTCCACTGCCCTTCCAGACCAGCAGCATGCTGGACCTGCCTCATCGAGGTTGTACTGCCAAACCAGGAGACTCACCTTGGACTGAGGTGGCGATGCACCTCGCAGAAGAGCTGGAACTGGGCCATTACTAAATGATAAATGACTAGTTTTGATATTTTTTCCTTGTGCAGACTGCTTGCATTCAAATAACCTTATAATATTGAacaatcataatatatgatgtCATCCTCTCTCCTCAACGCTTTTTACTTGCTCCAGactgttttttaattgaatcttatttttttccccacccacacatacgtTCCTAGCACCTGTGGCGAGCTGTGTGGGATGTTaacaaaatataccaaaatatacatCAAGTTACAGTCAGGTCCAGCATATATGCCAGTTGCTTTTCTGTTCATACACAGACAAGTCTAGCCATTTCTTCACATTTCTAGCAGGGTTGTACAAAATTTAAATTGGAATTCCATGAAATTCATAATCCATAATTAAGCATATAACAATGAAGCTttacagtatgtattacatatgatTTTTCAGTCTCTCTTTGCTGGATTTCAAtttctctgctgagaaatgTTGGACACGTGCAGATAGCTGTGCCCCTAAAATAACAACCTGCCAAAGTctgagcacacctggctcttaaagtgaatggcaagtgacacgctcaTTGTGTTATTGCATGTAACATCCAAAAACAAACCCATGAATAAATAAGAGAATCAGTACA
>XM_022678559.1
TACATTAGTGGCTCTATTGTGGAGAGTTGCCAGGCAACAGAGAAATCCGTCAACAGACAGTTCATGGCAGAGGCTGGTGGGACTCGTCGTAAGGTGCGCTGGCTGCAGAGAGCGCCGCCCGCAGGTGATTTATTCCAGGCCGCGGTGTCCGGAGATCAGGAATGGCTGAGCTTCAGTCTGAGGAGAACACTCTCACCCTCACAGCCCAACAAACAGggtCTCACAGTGCTCCATGTGGCTGCTCAGCATGGCCGGCTCGACTGCGTAAAGCTGCTTGTGGAGGCTTACTGTGTTGATGTGAACGCTAGCTGTCCGTGTGGGCGGAGACCCCTGCACATGGTGCTCAGTCCACAGAGCAAACCCCACTCACACACCTGCATTATATACCTGCTGCAGCACGGAGCCCAGCACAACGTATCCACAGATGAAGGACTGACCCCTCTGCATATGGCTGCAGCTGAAGGCCTGAAAAACTGTGTTGAAACGCTGGTTGAGGTTGGAGCAGACACACATGCCATTGACAAACACGGACACACACCACTCGACCTCGCTCGCTTATGGGGTCACAGGGTCATTGCCAGGTTTCTAAAGAATGCCATGTGGCAGAGAGATAAGAAGAAAGAAATGGAGGAACGTAAAGCTCTGCAGAATCTCCGGCACAATCTGATGTGGCTGTACAGGACTGCAGAGAGCAAGGAAAAGGTGACCAGAGAGGCGGTTAATGTGCAGAAGGTCACTGAGTGGGCTGAGAAGAAAGGGCTTCCTTTGCTCTGGCCTCCTCTCAGGAGCTCAGGAGCTTTAAACCATAGCTGCTTCCCATCCACTGAGCCTCCGATTACAAAGAGCAAAAAGAAATTCAAGGAAAGTTCACCCACACCAATGTGGGACATCTCTCCAAACCCCTGTAGACCTCCTCCAGCCAGTGTCAGCAGACCACAGGAGGTACGAATGGGAGTCCATCCAGAGAAAGCTCCACTAGAGCCAGATCTACGTAATAGAGTGACTTTGAGTTGTTTTGAGGATGGCCGCATCCACTACACTGCATCATGGGAGAACATTCCACAGTCAGTTCCTGCCCTGCCCATGGATGTCATCCAAAGAGGCCTGTTTCCATCTGCTTTTCCCTCCCGTATCACTTCTCCACTGCCCTTCCAGACCAGCAGCATGCTGGACCTGCCTCATCGAGGTTGTACTGCCAAACCAGGAGACTCACCTTGGACTGAGGTGGCGATGCACCTCGCAGAAGAGCTGGAACTGGGCCATTACTAAATGATAAATGACTAGTTTTGATATTTTTTCCTTGTGCAGACTGCTTGCATTCAAATAACCTTATAATATTGAacaatcataatatatgatgtCATCCTCTCTCCTCAACGCTTTTTACTTGCTCCAGactgttttttaattgaatcttatttttttccccacccacacatacgtTCCTAGCACCTGTGGCGAGCTGTGTGGGATGTTaacaaaatataccaaaatatacatCAAGTTACAGTCAGGTCCAGCATATATGCCAGTTGCTTTTCTGTTCATACACAGACAAGTCTAGCCATTTCTTCACATTTCTAGCAGGGTTGTACAAAATTTAAATTGGAATTCCATGAAATTCATAATCCATAATTAAGCATATAACAATGAAGCTttacagtatgtattacatatgatTTTTCAGTCTCTCTTTGCTGGATTTCAAtttctctgctgagaaatgTTGGACACGTGCAGATAGCTGTGCCCCTAAAATAACAACCTGCCAAAGTctgagcacacctggctcttaaagtgaatggcaagtgacacgctcaTTGTGTTATTGCATGTAACATCCAAAAACAAACCCATGAATAAATAAGAGAATCAGTACA

Function

GO: NA

KEGG:

id description
K21441 ANKRD53; ankyrin repeat domain-containing protein 53

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022678558.1 False 1857 mRNA 0.48 6 40785512 40792733
XM_022678559.1 True 1880 mRNA 0.48 6 40785512 40792759

Neighbor

gene id symbol gene type direction distance location
trnas-gcu_3 NA coding downstream 29471 40755960 ~ 40756041 (-)
trnak-cuu_8 NA coding downstream 118680 40666760 ~ 40666832 (-)
trnan-guu_8 NA coding downstream 171805 40613634 ~ 40613707 (-)
trnan-guu_7 NA coding downstream 172224 40613215 ~ 40613288 (-)
trnan-guu_6 NA coding downstream 172643 40612796 ~ 40612869 (-)
LOC103041524 NA coding upstream 31322 40824081 ~ 40833786 (-)
LOC111194366 NA coding upstream 116098 40908857 ~ 40909862 (-)
LOC111194367 NA coding upstream 227569 41020328 ~ 41023008 (-)
LOC103042841 NA coding upstream 234367 41027126 ~ 41031436 (-)
G148077 tex261,LOC106577837 non-coding downstream 3511 40772650 ~ 40782001 (-)
G148056 cunh20orf27,c7h20orf27,si:ch211-74f19.2,c1h20orf27,LOC104943354 non-coding downstream 92863 40675959 ~ 40692649 (-)
G148058 NA non-coding downstream 142105 40643146 ~ 40643407 (-)
G148057 NA non-coding downstream 143517 40634329 ~ 40641995 (-)
G148052 NA non-coding downstream 155825 40629471 ~ 40629687 (-)
G148088 NA non-coding upstream 38636 40831395 ~ 40831664 (-)
G148120 NA non-coding upstream 82668 40875427 ~ 40876486 (-)
LOC111194403 NA non-coding upstream 141641 40934400 ~ 40935933 (-)
LOC111194404 NA non-coding upstream 155768 40948527 ~ 40950045 (-)
G148173 NA non-coding upstream 196463 40989222 ~ 40989474 (-)
G147828 NA other downstream 963937 39820751 ~ 39821575 (-)
ufsp1 NA other downstream 967749 39815907 ~ 39817763 (-)
tmem256 tmem256,LOC107564775,LOC107659713,LOC107560291 other downstream 1287278 39490561 ~ 39498234 (-)
fgf11 fgf11,fgf11a,LOC107664286,LOC107753963,LOC107750771,LOC107659728 other downstream 1387500 39265349 ~ 39398012 (-)
LOC103036465 NA other downstream 1661697 39117267 ~ 39123815 (-)

Expression


Co-expression Network