Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC111194181 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 23181717 ~ 23185264 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002650973.1 | True | 590 | lncRNA | 0.43 | 3 | 23181717 | 23185264 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaa-cgc_2 | NA | coding | upstream | 116359 | 23065287 ~ 23065358 (+) |
| trnat-cgu | NA | coding | upstream | 116618 | 23065028 ~ 23065099 (+) |
| adcyap1 | adcyap1 | coding | upstream | 159305 | 23016781 ~ 23022412 (+) |
| LOC103031382 | NA | coding | upstream | 177723 | 22991462 ~ 23003994 (+) |
| tyms | tyms | coding | upstream | 242458 | 22934665 ~ 22939259 (+) |
| smchd1 | smchd1 | coding | downstream | 5200 | 23190464 ~ 23250746 (+) |
| emilin2 | NA | coding | downstream | 70413 | 23255677 ~ 23290625 (+) |
| LOC103023765 | NA | coding | downstream | 250330 | 23435594 ~ 23442090 (+) |
| LOC103024399 | pde5a,pde5ab | coding | downstream | 387539 | 23572803 ~ 23664047 (+) |
| LOC103024717 | LOC108436153,LOC108267195,LOC107730122,LOC559800,LOC107698664,LOC107559837 | coding | downstream | 525244 | 23710508 ~ 23734928 (+) |
| G143683 | NA | non-coding | upstream | 2033 | 23146051 ~ 23179684 (+) |
| LOC111194176 | NA | non-coding | upstream | 6917 | 23172948 ~ 23174800 (+) |
| G143691 | NA | non-coding | upstream | 7929 | 23170596 ~ 23173788 (+) |
| LOC111194177 | NA | non-coding | upstream | 9358 | 23170450 ~ 23172359 (+) |
| LOC111194182 | NA | non-coding | upstream | 17302 | 23162876 ~ 23164415 (+) |
| G143694 | NA | non-coding | downstream | 1764 | 23187028 ~ 23189236 (+) |
| G143684 | NA | non-coding | downstream | 106048 | 23291312 ~ 23291924 (+) |
| G143698 | NA | non-coding | downstream | 107728 | 23292992 ~ 23293214 (+) |
| G143699 | NA | non-coding | downstream | 108802 | 23294066 ~ 23294388 (+) |
| G143701 | NA | non-coding | downstream | 110209 | 23295473 ~ 23295859 (+) |
| G143324 | NA | other | upstream | 571270 | 22535685 ~ 22610447 (+) |
| G143182 | mlrn,LOC103039566,LOC106517213,LOC104925296,LOC105008240,LOC106578694 | other | upstream | 1273403 | 21811291 ~ 21908314 (+) |
| G143122 | LOC108436138 | other | upstream | 1535012 | 21645905 ~ 21646705 (+) |
| LOC103047556 | LOC108436107,LOC108267807 | other | upstream | 1570035 | 21598682 ~ 21611682 (+) |
| plag1 | plag1,LOC107730125,LOC107698667,LOC107660303,LOC107705642,LOC107570428 | other | upstream | 1601993 | 21569082 ~ 21579724 (+) |
| LOC111194251 | NA | other | downstream | 199904 | 23385168 ~ 23395240 (+) |
| LOC111194174 | NA | other | downstream | 218424 | 23403688 ~ 23406894 (+) |
| G143836 | NA | other | downstream | 642684 | 23827948 ~ 23916082 (+) |
| ppp3ca | ppp3ca,LOC103369319 | other | downstream | 1251115 | 24436379 ~ 24602402 (+) |
| G144017 | NA | other | downstream | 1521819 | 24707083 ~ 24711533 (+) |
