LOC111194189


Basic Information

Item Value
gene id LOC111194189
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1626955 ~ 1638255 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002650979.1
ATGAATTTTGGTGCAAGTGGGGTGGATGGGTGAAAGTCCAAGTGTGTTGATGGAAGGCGCAATATGAAGGATgtggttaCTAGTGGGAGCCTGAGGCAAATCTCACCATCCCATCCTCGTCTGAAACACACAGTGAGAGCTGCAGAGTGACCGGAGGACCTGCAAATCCTAAAACT

Function

GO:

id name namespace
GO:0050878 regulation of body fluid levels biological_process
GO:0080090 regulation of primary metabolic process biological_process
GO:0051171 regulation of nitrogen compound metabolic process biological_process
GO:0019538 protein metabolic process biological_process
GO:0030162 regulation of proteolysis biological_process
GO:0001775 cell activation biological_process
GO:0030168 platelet activation biological_process
GO:1901564 organonitrogen compound metabolic process biological_process
GO:0051246 regulation of protein metabolic process biological_process
GO:0007596 blood coagulation biological_process
GO:0007599 hemostasis biological_process
GO:0006508 proteolysis biological_process
GO:0060255 regulation of macromolecule metabolic process biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002650979.1 True 176 ncRNA 0.49 4 1626955 1638255

Neighbor

gene id symbol gene type direction distance location
cdc73 cdc73 coding upstream 32879 1564930 ~ 1594076 (+)
LOC111194186 NA coding upstream 135615 1489305 ~ 1491340 (+)
rnf32 NA coding upstream 177928 1436940 ~ 1449027 (+)
rbm33 rbm33 coding upstream 291762 1300585 ~ 1335193 (+)
LOC103046777 NA coding upstream 381186 1241235 ~ 1245769 (+)
LOC103022771 NA coding downstream 46138 1684393 ~ 1692239 (+)
LOC103022156 NA coding downstream 85280 1723535 ~ 1735903 (+)
LOC111194259 NA coding downstream 101916 1740171 ~ 1746238 (+)
tsc22d2 NA coding downstream 138970 1777225 ~ 1802319 (+)
LOC103043726 LOC103043726,LOC105899208 coding downstream 172470 1810725 ~ 1817212 (+)
G137837 NA non-coding upstream 89674 1532189 ~ 1537281 (+)
G137833 NA non-coding upstream 95032 1524712 ~ 1531923 (+)
G137858 dcaf8 non-coding upstream 109027 1516479 ~ 1517928 (+)
G137857 NA non-coding upstream 114016 1509653 ~ 1512939 (+)
G137856 NA non-coding upstream 117401 1508265 ~ 1509554 (+)
G137880 NA non-coding downstream 82487 1720742 ~ 1720954 (+)
G137827 pfn2,pfn2l,LOC107681776 non-coding downstream 123783 1762038 ~ 1770190 (+)
G137890 NA non-coding downstream 166672 1804927 ~ 1806180 (+)
G137889 NA non-coding downstream 169950 1808205 ~ 1809612 (+)
G137898 NA non-coding downstream 240817 1879072 ~ 1879392 (+)
G137826 LOC108430781,LOC108267757 other upstream 126999 1491816 ~ 1499956 (+)
mrps14 mrps14 other upstream 586985 1037861 ~ 1039970 (+)
G137756 kiaa0040 other upstream 638317 980980 ~ 988638 (+)
rfwd2 rfwd2,LOC107658354 other upstream 845759 762715 ~ 781196 (+)
G137614 NA other upstream 1532382 93285 ~ 94573 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other downstream 197222 1835477 ~ 1851313 (+)
G137929 NA other downstream 384500 2022755 ~ 2024386 (+)
LOC103045052 cfap57,LOC106594647 other downstream 1262220 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 1443801 3082056 ~ 3084865 (+)
LOC103026108 selenot,selt1a,LOC107681817,LOC107708642 other downstream 1477165 3115420 ~ 3119488 (+)

Expression


Co-expression Network