Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC111194249 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 23549322 ~ 23550553 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002651000.1 | True | 350 | lncRNA | 0.43 | 3 | 23549322 | 23550553 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103023765 | NA | coding | upstream | 107232 | 23435594 ~ 23442090 (+) |
| emilin2 | NA | coding | upstream | 258697 | 23255677 ~ 23290625 (+) |
| smchd1 | smchd1 | coding | upstream | 298576 | 23190464 ~ 23250746 (+) |
| trnaa-cgc_2 | NA | coding | upstream | 483964 | 23065287 ~ 23065358 (+) |
| trnat-cgu | NA | coding | upstream | 484223 | 23065028 ~ 23065099 (+) |
| LOC103024399 | pde5a,pde5ab | coding | downstream | 22250 | 23572803 ~ 23664047 (+) |
| LOC103024717 | LOC108436153,LOC108267195,LOC107730122,LOC559800,LOC107698664,LOC107559837 | coding | downstream | 159955 | 23710508 ~ 23734928 (+) |
| LOC103035300 | cacnb2,LOC102289395 | coding | downstream | 229699 | 23780252 ~ 23905504 (+) |
| arl5b | arl5b,LOC103034648,LOC100708858,LOC107591025,LOC103373092 | coding | downstream | 395550 | 23946103 ~ 23971572 (+) |
| LOC103039837 | nfib | coding | downstream | 554782 | 24105335 ~ 24140202 (+) |
| LOC111194209 | NA | non-coding | upstream | 20958 | 23526023 ~ 23528364 (+) |
| LOC111194207 | NA | non-coding | upstream | 23387 | 23523972 ~ 23525935 (+) |
| LOC103022725 | NA | non-coding | upstream | 28818 | 23518321 ~ 23520504 (+) |
| LOC111194184 | NA | non-coding | upstream | 92016 | 23455773 ~ 23457306 (+) |
| LOC111194185 | NA | non-coding | upstream | 155155 | 23384782 ~ 23394167 (+) |
| G143790 | NA | non-coding | downstream | 73261 | 23623814 ~ 23625655 (+) |
| G143793 | LOC107571931 | non-coding | downstream | 120303 | 23670856 ~ 23671871 (+) |
| G143841 | NA | non-coding | downstream | 242386 | 23792939 ~ 23793178 (+) |
| G143867 | NA | non-coding | downstream | 411628 | 23962181 ~ 24020510 (+) |
| G143919 | NA | non-coding | downstream | 494712 | 24045265 ~ 24046442 (+) |
| LOC111194174 | NA | other | upstream | 142428 | 23403688 ~ 23406894 (+) |
| LOC111194251 | NA | other | upstream | 154082 | 23385168 ~ 23395240 (+) |
| G143324 | NA | other | upstream | 938875 | 22535685 ~ 22610447 (+) |
| G143182 | mlrn,LOC103039566,LOC106517213,LOC104925296,LOC105008240,LOC106578694 | other | upstream | 1641008 | 21811291 ~ 21908314 (+) |
| G143122 | LOC108436138 | other | upstream | 1902617 | 21645905 ~ 21646705 (+) |
| G143836 | NA | other | downstream | 277395 | 23827948 ~ 23916082 (+) |
| ppp3ca | ppp3ca,LOC103369319 | other | downstream | 885826 | 24436379 ~ 24602402 (+) |
| G144017 | NA | other | downstream | 1156530 | 24707083 ~ 24711533 (+) |
| LOC111188189 | NA | other | downstream | 1306219 | 24856772 ~ 24876737 (+) |
| LOC111194253 | NA | other | downstream | 1342439 | 24892992 ~ 24894553 (+) |
