G41969


Basic Information

Item Value
gene id G41969
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 4695206 ~ 4695713 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47655
AAAAATCTTTATTTGTAGCCAAAAAAACGGACAGCAAAAAGCCAGCTCCAGTCTCCCATATACATATTGCAATTTCTACCACAATTTGCACTTAACATTGTAAATGACCATACTTTTATTCACTATGATTCTGACTAGTCACTGACATAATATTTCACATACTGTATGATTCAAATTCACCACTGAGTGTGTATAGATGCCTGAGGTGTGTTTGCTGTAAAAGAGCCTCCCAGTAGTAGAAGGATTTAATTTTTCCCCAAAGTTTGTTCAAATTCCAGGTCGTTGTCCAGGTTGCCAGGCCTTTTAAGACGCTGCCAGCTCTCAAACCCTCAAATGCCCTTGGCAAAGTGAAATTCTTAGAGCAGAAGCAATAATATGGTGTGCAGAAGATGAATTCGTAACACCTGTTTCACTGGTGTCTTTCAAAACAACCCCCACCACGTTTGAGGCTAACTTACACAAGGTTTTCTTTTATAAGAGAAAATGGTCACATCTGGAGCTGGTTAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47655 True 508 lncRNA 0.33 1 4695206 4695713

Neighbor

gene id symbol gene type direction distance location
CI01000006_04538991_04543506 RFC2 coding upstream 151602 4538991 ~ 4543604 (+)
CI01000006_04509718_04523326 NFRKB coding upstream 171466 4509718 ~ 4523740 (+)
CI01000006_04493236_04507301 ST14B coding upstream 187008 4493236 ~ 4508198 (+)
CI01000006_04467086_04477770 PPME1 coding upstream 217273 4467086 ~ 4477933 (+)
CI01000006_04455069_04463903 SMS coding upstream 231281 4455069 ~ 4463925 (+)
CI01000006_04703916_04717922 NA coding downstream 7158 4702871 ~ 4718123 (+)
CI01000006_04776793_04779651 IGSF9BB, IGSF9B coding downstream 81080 4776793 ~ 4779687 (+)
CI01000006_04786488_04866122 IGSF9BB, IGSF9B coding downstream 90712 4786425 ~ 4866504 (+)
CI01000006_04931074_04985139 ARHGAP32, ARHGAP32B coding downstream 235361 4931074 ~ 4986173 (+)
CI01000006_04989318_04992332 SC5D coding downstream 293605 4989318 ~ 4992841 (+)
G41965 NA non-coding upstream 7939 4687044 ~ 4687267 (+)
G41885 NA non-coding upstream 61005 4632573 ~ 4634201 (+)
G41940 NA non-coding upstream 65105 4629831 ~ 4630101 (+)
G41887 NA non-coding upstream 66809 4628155 ~ 4628397 (+)
G41939 NA non-coding upstream 67734 4627257 ~ 4627472 (+)
G41970 NA non-coding downstream 5211 4700924 ~ 4701179 (+)
G42002 NA non-coding downstream 273942 4969655 ~ 5039311 (+)
G42181 NA non-coding downstream 616319 5312032 ~ 5312639 (+)
G42183 NA non-coding downstream 618990 5314703 ~ 5314958 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 959228 3734554 ~ 3736035 (+)
G41591 NA other upstream 1855785 2836167 ~ 2839421 (+)
G41424 NA other upstream 2034636 2645662 ~ 2660570 (+)
G41170 NA other upstream 2999385 1692065 ~ 1695821 (+)
G40768 NA other upstream 4202180 488407 ~ 493026 (+)
G41996 NA other downstream 421493 5117206 ~ 5124149 (+)
G43896 NA other downstream 1074376 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 1412771 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 1426322 6122035 ~ 6122751 (+)
CI01000006_07167131_07168925 NA other downstream 2471076 7166778 ~ 7168925 (+)

Expression


Co-expression Network