LOC111194403


Basic Information

Item Value
gene id LOC111194403
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 40934400 ~ 40935933 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002651073.1
tgatgatgagtcaCAGCTTTCTGACAAATCCATTGAGTCTGACTTGACCATTTCGGATGAAATTCCCCTAGCTGACCCTGCACCCTGCACTGAAAGCTCTGAACCCAGCACAGTTTTAACACAAACAGAAGCAGCACACACATCTAATGTAGATACTTTATCACTTGCTGATTCACACATACCACATACTTCCGAGGTAGACAGTCACGTTAGAACACGTGCAGGAAGATTAGTAAAATCAGTGAATAGGCTGATAGAGTCAATGGTTCAGAGACCATTCCTAAAAGGTCCACATGTTTCTATTGGGAACAGTtcctaaactttttttgttttaaagcttAAACTCATATAGAGCCttaatttgtttacattttgtcaGTGCTTATGTTATGAGTTTATGGTGAACAAGTATTGTGTGGTGTATAAGGCATCACATTACTCTAGGGAATTTTGGAGACCTGATCAACCTCTGTCTTTCCTGAACCTTGCACTTGAGGTAACTTTTGAGTTGAATGTAGACTAGGTACTACTGTTTACTTGTTCCAGATTGTATCAGCATAGGGCACTTTTGACTCCTTATCGCATCCAATCAGGATGTTGGCGAATTTTAGGAGGGGTGAATGTAAcaagtttaaaaatacttttgtttttctgttaaaattccaccaaaatcctgatttttgtgtaaatatctgtttttatgttccatttatttcatatttgtacTGGGGGATCTTTTATTTTAGAGTGTTGGTTTACTGTgtactgtccctttaagagactCAGCTCTATTTGGCGCCATCGGCGTACTGATCTCAGTCTGTGTATAACTAACAGAGAGAAGACCAGCAAAATTAAAGCATCCAAACCAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002651073.1 True 874 lncRNA 0.38 2 40934400 40935933

Neighbor

gene id symbol gene type direction distance location
LOC111194366 NA coding downstream 24538 40908857 ~ 40909862 (-)
LOC103041524 NA coding downstream 100614 40824081 ~ 40833786 (-)
ankrd53 NA coding downstream 141641 40785512 ~ 40792759 (-)
trnas-gcu_3 NA coding downstream 178359 40755960 ~ 40756041 (-)
trnak-cuu_8 NA coding downstream 267568 40666760 ~ 40666832 (-)
LOC111194367 NA coding upstream 84395 41020328 ~ 41023008 (-)
LOC103042841 NA coding upstream 91193 41027126 ~ 41031436 (-)
G148120 NA non-coding downstream 57914 40875427 ~ 40876486 (-)
G148088 NA non-coding downstream 102736 40831395 ~ 40831664 (-)
G148077 tex261,LOC106577837 non-coding downstream 152399 40772650 ~ 40782001 (-)
G148056 cunh20orf27,c7h20orf27,si:ch211-74f19.2,c1h20orf27,LOC104943354 non-coding downstream 241751 40675959 ~ 40692649 (-)
G148058 NA non-coding downstream 290993 40643146 ~ 40643407 (-)
LOC111194404 NA non-coding upstream 12594 40948527 ~ 40950045 (-)
G148173 NA non-coding upstream 53289 40989222 ~ 40989474 (-)
G147828 NA other downstream 1112825 39820751 ~ 39821575 (-)
ufsp1 NA other downstream 1116637 39815907 ~ 39817763 (-)
tmem256 tmem256,LOC107564775,LOC107659713,LOC107560291 other downstream 1436166 39490561 ~ 39498234 (-)
fgf11 fgf11,fgf11a,LOC107664286,LOC107753963,LOC107750771,LOC107659728 other downstream 1536388 39265349 ~ 39398012 (-)
LOC103036465 NA other downstream 1810585 39117267 ~ 39123815 (-)

Expression


Co-expression Network