trnae-uuc_20



Basic Information


Item Value
gene id trnae-uuc_20
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 15413776 ~ 15413847 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>trnae-uuc_20
TCCCATATGGTCTAACGCGTAGGATTTCTGGCTTTCATCCAGACGGTCCGGGTTCGAATCCCGGTATGGGAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnae-uuc_20 True 72 tRNA 0.53 1 15413776 15413847

Neighbor


gene id symbol gene type direction distance location
LOC103043450 LOC103043450 coding upstream 28870 15379678 ~ 15384906 (+)
LOC103043145 LOC108440275 coding upstream 35241 15375965 ~ 15378535 (+)
LOC111194243 NA coding upstream 38372 15367518 ~ 15375404 (+)
LOC103042634 capn1,LOC108440273,LOC106608991,LOC107728026,LOC106578020 coding upstream 47445 15322011 ~ 15366331 (+)
LOC103038739 zgc:101810,LOC103038739,LOC108440263,LOC108267909,LOC107747924,LOC107692827,LOC105026763 coding upstream 586713 14818945 ~ 14827063 (+)
LOC103044992 kcnj10,LOC108440277,LOC107703868,LOC107728032,LOC107692845,LOC102205965 coding downstream 29974 15443821 ~ 15476215 (+)
LOC103044680 NA coding downstream 67940 15481787 ~ 15499505 (+)
efcab14 efcab14,LOC106569140 coding downstream 1513581 16927428 ~ 16940368 (+)
rpe65 rpe65,rpe65a,LOC108436856,LOC107705134,LOC107708597,LOC107693590 coding downstream 1580492 16994339 ~ 17004804 (+)
LOC111194332 NA coding downstream 1821352 17235199 ~ 17304091 (+)
G141814 NA non-coding upstream 8656 15400974 ~ 15405120 (+)
G141795 NA non-coding upstream 150096 15262792 ~ 15263680 (+)
G141790 LOC108440271,LOC101884025,LOC107692834,LOC103376102 non-coding upstream 175590 15223590 ~ 15238186 (+)
G141788 NA non-coding upstream 190466 15218508 ~ 15223310 (+)
G141771 NA non-coding upstream 204158 15154345 ~ 15209618 (+)
G141840 NA non-coding downstream 93503 15507350 ~ 15538748 (+)
G141845 NA non-coding downstream 100958 15514805 ~ 15532685 (+)
G141978 NA non-coding downstream 157731 15571578 ~ 15571813 (+)
G141981 NA non-coding downstream 1067632 16481479 ~ 16481682 (+)
G142040 NA non-coding downstream 1373231 16787078 ~ 16787609 (+)
G141754 pnp5a,LOC108440276,LOC103368940,LOC107747996,LOC107692836,LOC107728028,LOC108267282,LOC107570765,LOC107703870 other upstream 11872 15385616 ~ 15401904 (+)
G141791 NA other upstream 128319 15228710 ~ 15285457 (+)
G141740 LOC108440267 other upstream 356803 15054657 ~ 15056973 (+)
b4gat1 b4gat1,LOC107747893,LOC107745213,LOC107696735 other upstream 628964 14779181 ~ 14784812 (+)
G141495 NA other upstream 883480 14528140 ~ 14530296 (+)
LOC103022185 ankrd13c,LOC108436872,LOC105898977 other downstream 1534535 16948382 ~ 16967950 (+)
G142067 LOC108436873,LOC108267642,LOC105898987 other downstream 1558355 16972202 ~ 16985295 (+)
G142093 abcf3 other downstream 1644447 17058294 ~ 17073484 (+)
G142166 LOC108436878 other downstream 1789375 17203222 ~ 17204493 (+)
G142378 gpaa1 other downstream 3442389 18856236 ~ 18893509 (+)

Expression



Co-expression Network