trnae-uuc_21


Basic Information

Item Value
gene id trnae-uuc_21
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 32056797 ~ 32056868 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnae-uuc_21
TCCCATATGGTCTAACGCGTAGGATTTCTGGCTTTCATCCAGACGGTCCGGGTTCGAATCCCGGTATGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnae-uuc_21 True 72 tRNA 0.53 1 32056797 32056868

Neighbor

gene id symbol gene type direction distance location
plaa plaa,LOC107549730,LOC107661955,LOC107660709 coding downstream 340072 31709203 ~ 31716725 (-)
sh3tc1 sh3tc1 coding downstream 378251 31656834 ~ 31678546 (-)
htra3 htra3,LOC107757896,LOC107661977,LOC107549726,LOC107707797,LOC107660743 coding downstream 401688 31642324 ~ 31655109 (-)
LOC111194360 NA coding downstream 462410 31592291 ~ 31594387 (-)
ttc5 ttc5,LOC107738047,LOC107683587 coding downstream 483972 31566918 ~ 31572825 (-)
arap2 NA coding upstream 1776466 33833334 ~ 34001620 (-)
paqr9 paqr9 coding upstream 2023386 34080254 ~ 34088604 (-)
LOC111194385 NA coding upstream 2045891 34102759 ~ 34109347 (-)
LOC103030854 LOC103030854,LOC108428571 coding upstream 2375963 34432831 ~ 34458413 (-)
nwd2 nwd2,LOC107661962 coding upstream 2408597 34465465 ~ 34556703 (-)
G146031 NA non-coding downstream 122730 31933854 ~ 31934067 (-)
G146030 NA non-coding downstream 130247 31925521 ~ 31926550 (-)
LOC111194382 NA non-coding downstream 207492 31846883 ~ 31849305 (-)
G146002 NA non-coding downstream 273556 31718604 ~ 31783241 (-)
G146005 NA non-coding downstream 299139 31757100 ~ 31757658 (-)
G146051 NA non-coding upstream 14873 32071741 ~ 32072104 (-)
G146060 NA non-coding upstream 170922 32227790 ~ 32228050 (-)
G146066 NA non-coding upstream 222067 32278935 ~ 32279973 (-)
G146068 NA non-coding upstream 229514 32286382 ~ 32286759 (-)
G146078 NA non-coding upstream 317680 32374548 ~ 32374834 (-)
cckar cckar,LOC106608554 other downstream 171388 31871057 ~ 31885409 (-)
LOC103035326 sall2 other downstream 498336 31550529 ~ 31558461 (-)
LOC103036756 LOC103036756,LOC108434598 other downstream 554136 31499916 ~ 31502661 (-)
G145899 NA other downstream 570727 31483943 ~ 31486070 (-)
LOC103041855 LOC108434590,LOC106577649,LOC105907155,LOC108267266,LOC107707052,LOC107738084,LOC107595290 other downstream 829219 31223447 ~ 31227578 (-)
G146175 pcdh7,LOC107568147,LOC107753999 other upstream 1043429 33100297 ~ 33105587 (-)
LOC107197333 NA other upstream 1728227 33785095 ~ 33785421 (-)
LOC103031173 adam19a,LOC108428568,LOC108267694,LOC107570237,LOC107660716,LOC106608513 other upstream 2173052 34229920 ~ 34376670 (-)
hspa12b cct7,hspa12b,LOC107697251,LOC107583281,LOC107721663,LOC107721672,LOC107697252,LOC107744271,LOC107691462,LOC107571934 other upstream 3348030 35404898 ~ 35435707 (-)
G146584 paip2b,LOC103027680,LOC108428580,LOC108263850 other upstream 3406329 35463197 ~ 35479194 (-)

Expression


Co-expression Network