trnas-gcu_3


Basic Information

Item Value
gene id trnas-gcu_3
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 40755960 ~ 40756041 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnas-gcu_3
GACGaggtggccgagtggttaaggcgatggacTGCTAATCCATTGTGCTCTGCAcgcgtgggttcgaatcccatcCTCGtcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnas-gcu_3 True 82 tRNA 0.58 1 40755960 40756041

Neighbor

gene id symbol gene type direction distance location
trnak-cuu_8 NA coding downstream 89128 40666760 ~ 40666832 (-)
trnan-guu_8 NA coding downstream 142253 40613634 ~ 40613707 (-)
trnan-guu_7 NA coding downstream 142672 40613215 ~ 40613288 (-)
trnan-guu_6 NA coding downstream 143091 40612796 ~ 40612869 (-)
trnan-guu_5 NA coding downstream 143510 40612377 ~ 40612450 (-)
ankrd53 NA coding upstream 29471 40785512 ~ 40792759 (-)
LOC103041524 NA coding upstream 68040 40824081 ~ 40833786 (-)
LOC111194366 NA coding upstream 152816 40908857 ~ 40909862 (-)
LOC111194367 NA coding upstream 264287 41020328 ~ 41023008 (-)
LOC103042841 NA coding upstream 271085 41027126 ~ 41031436 (-)
G148056 cunh20orf27,c7h20orf27,si:ch211-74f19.2,c1h20orf27,LOC104943354 non-coding downstream 63311 40675959 ~ 40692649 (-)
G148058 NA non-coding downstream 112553 40643146 ~ 40643407 (-)
G148057 NA non-coding downstream 113965 40634329 ~ 40641995 (-)
G148052 NA non-coding downstream 126273 40629471 ~ 40629687 (-)
LOC111194401 tmem88,tmem88b,LOC104964151,LOC102237254,LOC103375639,LOC108410821 non-coding downstream 133873 40602296 ~ 40622087 (-)
G148077 tex261,LOC106577837 non-coding upstream 16609 40772650 ~ 40782001 (-)
G148088 NA non-coding upstream 75354 40831395 ~ 40831664 (-)
G148120 NA non-coding upstream 119386 40875427 ~ 40876486 (-)
LOC111194403 NA non-coding upstream 178359 40934400 ~ 40935933 (-)
LOC111194404 NA non-coding upstream 192486 40948527 ~ 40950045 (-)
G147828 NA other downstream 934385 39820751 ~ 39821575 (-)
ufsp1 NA other downstream 938197 39815907 ~ 39817763 (-)
tmem256 tmem256,LOC107564775,LOC107659713,LOC107560291 other downstream 1257726 39490561 ~ 39498234 (-)
fgf11 fgf11,fgf11a,LOC107664286,LOC107753963,LOC107750771,LOC107659728 other downstream 1357948 39265349 ~ 39398012 (-)
LOC103036465 NA other downstream 1632145 39117267 ~ 39123815 (-)

Expression


Co-expression Network