G41996


Basic Information

Item Value
gene id G41996
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 5117206 ~ 5124149 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47686
ATCTGAGTTCATCTCCATTTTTAACCAGACGTTCTGTCGTCTCAGAATAATACTGCAGGAGGACATGTAAAGGTTTAATCCTAGAGGCTTCAGGACACATGCTGCTTCTCCTAAATGGCAGCAATCAATTTTGATTACCGGCCACGGTTACTTTGAGAAGAGCCCATCAAAGTTTTATTAAGAAGACGGGTGATAATTACAGCCTTGCACGGACCAAAAACCTGGAGTCTGAGCCTTGCTAATGATTGGAAGCTGAGAGATAAAATGACGGTTCAGAAGACCTTAATCCAAACTCTGAGAGGACCGGGCAGACAATTACTTTAACCGTTACTTGATGAGGACAGTCCCTCAGGCGACTGATGGCTCTCCCGTTCACTCCCCTTGACTGGGACGCTCTTTAACCACAGTGGCGTTTATGGAGAAGGAGATGAAAATGACTCGGTCTGGCACCTCGGCGAAGCTTATCATTATTTCAGAGAAAAGCCATGAAATAAAAAGGACAGACCTTTCCGGAGACCGTTTGTGGAGACAGGCGCCACGTCTATTGACACCACCTGATATGTGCCGGATTGAACTCAGACTGAACTCGAAAGCACTCTGGAACTACTTAAAAATGCTTCCTGTTGCAACTTTTGCGCAAAGAAAATACCATAATCAAAGTGCTTTTCTGCATATGACATGGGACCGGCGGGTGCAATATTTCACAGGGGTGGGAGAGATGAAACCCTTTAGAAAGACTGTGTAACTATAATTACACAGTGCAGCTGAAGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47686 True 774 TUCP 0.45 2 5117206 5124149

Neighbor

gene id symbol gene type direction distance location
CI01000006_04989318_04992332 SC5D coding upstream 124365 4989318 ~ 4992841 (+)
CI01000006_04931074_04985139 ARHGAP32, ARHGAP32B coding upstream 131033 4931074 ~ 4986173 (+)
CI01000006_04786488_04866122 IGSF9BB, IGSF9B coding upstream 250702 4786425 ~ 4866504 (+)
CI01000006_04776793_04779651 IGSF9BB, IGSF9B coding upstream 337519 4776793 ~ 4779687 (+)
CI01000006_04703916_04717922 NA coding upstream 399083 4702871 ~ 4718123 (+)
CI01000006_05169144_05174432 NA coding downstream 43968 5168117 ~ 5175303 (+)
CI01000006_05196006_05199842 NA coding downstream 71183 5195332 ~ 5200579 (+)
CI01000006_05276965_05313266 NA coding downstream 152607 5276756 ~ 5314230 (+)
CI01000006_05380873_05439031 NA coding downstream 256170 5380319 ~ 5439517 (+)
CI01000006_05469329_05478118 NA coding downstream 344868 5469017 ~ 5478629 (+)
G42002 NA non-coding upstream 77895 4969655 ~ 5039311 (+)
G41970 NA non-coding upstream 416027 4700924 ~ 4701179 (+)
G41969 NA non-coding upstream 421493 4695206 ~ 4695713 (+)
G41965 NA non-coding upstream 429939 4687044 ~ 4687267 (+)
G42181 NA non-coding downstream 187883 5312032 ~ 5312639 (+)
G42183 NA non-coding downstream 190554 5314703 ~ 5314958 (+)
G42197 NA non-coding downstream 215572 5339721 ~ 5339921 (+)
G42217 NA non-coding downstream 267784 5391933 ~ 5392138 (+)
G42220 NA non-coding downstream 270770 5394919 ~ 5395288 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 1381228 3734554 ~ 3736035 (+)
G41591 NA other upstream 2277785 2836167 ~ 2839421 (+)
G41424 NA other upstream 2456636 2645662 ~ 2660570 (+)
G41170 NA other upstream 3421385 1692065 ~ 1695821 (+)
G40768 NA other upstream 4624180 488407 ~ 493026 (+)
G43896 NA other downstream 645940 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 984335 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 997886 6122035 ~ 6122751 (+)
CI01000006_07167131_07168925 NA other downstream 2042640 7166778 ~ 7168925 (+)
G44872 NA other downstream 2232203 7356352 ~ 7387884 (+)

Expression


Co-expression Network