Gene
RNA
| Item | Value |
|---|---|
| gene id | G42183 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 5314703 ~ 5314958 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| glucoside xylosyltransferase 2-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU47873 | True | 202 | lncRNA | 0.41 | 2 | 5314703 | 5314958 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_05276965_05313266 | NA | coding | upstream | 473 | 5276756 ~ 5314230 (+) |
| CI01000006_05196006_05199842 | NA | coding | upstream | 114124 | 5195332 ~ 5200579 (+) |
| CI01000006_05169144_05174432 | NA | coding | upstream | 139400 | 5168117 ~ 5175303 (+) |
| CI01000006_04989318_04992332 | SC5D | coding | upstream | 321862 | 4989318 ~ 4992841 (+) |
| CI01000006_04931074_04985139 | ARHGAP32, ARHGAP32B | coding | upstream | 328530 | 4931074 ~ 4986173 (+) |
| CI01000006_05380873_05439031 | NA | coding | downstream | 65361 | 5380319 ~ 5439517 (+) |
| CI01000006_05469329_05478118 | NA | coding | downstream | 154059 | 5469017 ~ 5478629 (+) |
| CI01000006_05617900_05693346 | NCAM1, NCAM1A | coding | downstream | 302942 | 5617900 ~ 5693346 (+) |
| CI01000006_05719079_05723838 | NA | coding | downstream | 404121 | 5719079 ~ 5724165 (+) |
| CI01000006_05729706_05734532 | NA | coding | downstream | 414310 | 5729268 ~ 5734668 (+) |
| G42181 | NA | non-coding | upstream | 2064 | 5312032 ~ 5312639 (+) |
| G42002 | NA | non-coding | upstream | 275392 | 4969655 ~ 5039311 (+) |
| CI01000006_04703916_04717922 | NA | non-coding | upstream | 596929 | 4702871 ~ 4718123 (+) |
| G41970 | NA | non-coding | upstream | 613524 | 4700924 ~ 4701179 (+) |
| G41969 | NA | non-coding | upstream | 618990 | 4695206 ~ 4695713 (+) |
| G42197 | NA | non-coding | downstream | 24763 | 5339721 ~ 5339921 (+) |
| G42217 | NA | non-coding | downstream | 76975 | 5391933 ~ 5392138 (+) |
| G42220 | NA | non-coding | downstream | 79961 | 5394919 ~ 5395288 (+) |
| G42223 | NA | non-coding | downstream | 82472 | 5397430 ~ 5397705 (+) |
| G42224 | NA | non-coding | downstream | 82820 | 5397778 ~ 5398141 (+) |
| G41996 | NA | other | upstream | 190554 | 5117206 ~ 5124149 (+) |
| CI01000006_03734862_03735227 | BANF1, BANF1.S, BANF1.L | other | upstream | 1578725 | 3734554 ~ 3736035 (+) |
| G41591 | NA | other | upstream | 2475282 | 2836167 ~ 2839421 (+) |
| G41424 | NA | other | upstream | 2654133 | 2645662 ~ 2660570 (+) |
| G41170 | NA | other | upstream | 3618882 | 1692065 ~ 1695821 (+) |
| G43896 | NA | other | downstream | 455131 | 5770089 ~ 5771775 (+) |
| CI01000006_06104927_06109730 | NA | other | downstream | 793526 | 6104927 ~ 6109820 (+) |
| CI01000006_06122278_06122736 | NA | other | downstream | 807077 | 6122035 ~ 6122751 (+) |
| CI01000006_07167131_07168925 | NA | other | downstream | 1851831 | 7166778 ~ 7168925 (+) |
| G44872 | NA | other | downstream | 2041394 | 7356352 ~ 7387884 (+) |
