Gene
RNA
| Item | Value |
|---|---|
| gene id | G42223 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 5397430 ~ 5397705 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU47913 | True | 276 | lncRNA | 0.41 | 1 | 5397430 | 5397705 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_05276965_05313266 | NA | coding | upstream | 83200 | 5276756 ~ 5314230 (+) |
| CI01000006_05196006_05199842 | NA | coding | upstream | 196851 | 5195332 ~ 5200579 (+) |
| CI01000006_05169144_05174432 | NA | coding | upstream | 222127 | 5168117 ~ 5175303 (+) |
| CI01000006_04989318_04992332 | SC5D | coding | upstream | 404589 | 4989318 ~ 4992841 (+) |
| CI01000006_04931074_04985139 | ARHGAP32, ARHGAP32B | coding | upstream | 411257 | 4931074 ~ 4986173 (+) |
| CI01000006_05469329_05478118 | NA | coding | downstream | 71312 | 5469017 ~ 5478629 (+) |
| CI01000006_05617900_05693346 | NCAM1, NCAM1A | coding | downstream | 220195 | 5617900 ~ 5693346 (+) |
| CI01000006_05719079_05723838 | NA | coding | downstream | 321374 | 5719079 ~ 5724165 (+) |
| CI01000006_05729706_05734532 | NA | coding | downstream | 331563 | 5729268 ~ 5734668 (+) |
| CI01000006_05739275_05746584 | NA | coding | downstream | 341103 | 5738808 ~ 5747186 (+) |
| G42220 | NA | non-coding | upstream | 2142 | 5394919 ~ 5395288 (+) |
| G42217 | NA | non-coding | upstream | 5292 | 5391933 ~ 5392138 (+) |
| G42197 | NA | non-coding | upstream | 57509 | 5339721 ~ 5339921 (+) |
| G42183 | NA | non-coding | upstream | 82472 | 5314703 ~ 5314958 (+) |
| G42181 | NA | non-coding | upstream | 84791 | 5312032 ~ 5312639 (+) |
| G42224 | NA | non-coding | downstream | 73 | 5397778 ~ 5398141 (+) |
| G43933 | NA | non-coding | downstream | 30145 | 5427850 ~ 5428084 (+) |
| G43934 | NA | non-coding | downstream | 30395 | 5428100 ~ 5428318 (+) |
| G43942 | NA | non-coding | downstream | 44760 | 5442465 ~ 5442923 (+) |
| G43903 | NA | non-coding | downstream | 374176 | 5771881 ~ 5773949 (+) |
| G41996 | NA | other | upstream | 273281 | 5117206 ~ 5124149 (+) |
| CI01000006_03734862_03735227 | BANF1, BANF1.S, BANF1.L | other | upstream | 1661452 | 3734554 ~ 3736035 (+) |
| G41591 | NA | other | upstream | 2558009 | 2836167 ~ 2839421 (+) |
| G41424 | NA | other | upstream | 2736860 | 2645662 ~ 2660570 (+) |
| G41170 | NA | other | upstream | 3701609 | 1692065 ~ 1695821 (+) |
| G43896 | NA | other | downstream | 372384 | 5770089 ~ 5771775 (+) |
| CI01000006_06104927_06109730 | NA | other | downstream | 710779 | 6104927 ~ 6109820 (+) |
| CI01000006_06122278_06122736 | NA | other | downstream | 724330 | 6122035 ~ 6122751 (+) |
| CI01000006_07167131_07168925 | NA | other | downstream | 1769084 | 7166778 ~ 7168925 (+) |
| G44872 | NA | other | downstream | 1958647 | 7356352 ~ 7387884 (+) |
