G91633


Basic Information

Item Value
gene id G91633
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 17677865 ~ 17678205 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU123257
ttttttcttttgggaATGTCCAGTTGTTGTAAGGTTTTGGACTTTTGTGATAAAGTTTATTTCTGAGCTGTTAGATATAAAACTACAATTATGTCCAGCTGTTTAGTTATCATGTGATGCTtcggcacggtggcttagtggttagcacgttcgcctcccagcactggggtcttgggttcaagtccctatctgggtggagtttccatgtcctccctgtgtctgcgtgggtttcctccggggactccagtttcctcccacagtccaaaaacatggagatcaggtaaattggatactctaaattgcccagaaaaattgaatactctaaaaatttatctggtgtg

Function

GO: NA

KEGG:

id description
ko00053 Ascorbate and aldarate metabolism
ko00980 Metabolism of xenobiotics by cytochrome P450

RNA

RNA id representative length rna type GC content exon number start site end site
TU123257 True 341 lncRNA 0.43 1 17677865 17678205

Neighbor

gene id symbol gene type direction distance location
dnali1 NA coding upstream 40255 17634185 ~ 17637610 (+)
LOC103041872 phactr4 coding upstream 239666 17383964 ~ 17438199 (+)
LOC111193338 NA coding upstream 311395 17362133 ~ 17366470 (+)
hivep3 hivep3 coding upstream 326921 17272114 ~ 17350944 (+)
LOC103041278 serinc2l,LOC103041278,LOC107587884,LOC108269842,LOC108443421,LOC107732828,LOC107704843,LOC107597105 coding upstream 425168 17240552 ~ 17252697 (+)
rspo1 rspo1 coding downstream 29530 17707735 ~ 17753547 (+)
utp11 utp11 coding downstream 182375 17860580 ~ 17865075 (+)
LOC111193302 NA coding downstream 669819 18348024 ~ 18350624 (+)
LOC111193341 NA coding downstream 673758 18351963 ~ 18352643 (+)
LOC103024770 NA coding downstream 675958 18354163 ~ 18354889 (+)
G91628 NA non-coding upstream 18754 17657096 ~ 17659111 (+)
G91621 gpn2,LOC107700685,LOC107704877 non-coding upstream 49196 17627288 ~ 17628669 (+)
G91599 arid1a,LOC107704838 non-coding upstream 91668 17585501 ~ 17586197 (+)
G91597 NA non-coding upstream 102081 17574544 ~ 17575784 (+)
G91547 NA non-coding upstream 168887 17508750 ~ 17508978 (+)
LOC107197683 NA non-coding downstream 234906 17913111 ~ 17925434 (+)
G91690 NA non-coding downstream 253270 17931475 ~ 17931750 (+)
G91708 NA non-coding downstream 381973 18060178 ~ 18090208 (+)
G91721 NA non-coding downstream 597951 18276156 ~ 18276397 (+)
G91723 NA non-coding downstream 647255 18325460 ~ 18325723 (+)
rcc1 NA other upstream 229932 17358839 ~ 17447933 (+)
trim71 trim71,LOC107751884,LOC107657583,LOC107601676,LOC107723073,LOC107551222 other upstream 1258485 16395214 ~ 16419380 (+)
LOC103025288 LOC107578870,LOC108428970,LOC106578494,LOC108273189 other upstream 2394810 15276142 ~ 15283055 (+)
alg14 alg14,LOC107739035 other upstream 2461357 15160215 ~ 15216508 (+)
LOC103045856 NA other upstream 2904498 14662657 ~ 14773367 (+)
G91678 NA other downstream 233696 17911901 ~ 17912443 (+)
G91728 NA other downstream 669822 18348027 ~ 18361095 (+)
G91748 NA other downstream 722283 18400488 ~ 18421263 (+)
G91760 NA other downstream 813475 18491680 ~ 18492072 (+)
lyplal1 lyplal1 other downstream 816154 18494359 ~ 18507035 (+)

Expression


Co-expression Network