G44009


Basic Information

Item Value
gene id G44009
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6272938 ~ 6273227 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU49956
CACACCTAATGAACACTGTACCTGCCCAGTCCCTTGATGCCTGCGGACCCTCGTGCCAAACACTGCAGCCTCAGTCTCTCAATGGGGTCTGAACAATCCGACAGCTGCTTCTTGGCACTGATTGCCATCTCTCGGTCATGTCGCGATGTACCTGCCATCCTATACCTATCTGATCTGAAGGTGACAAGAGTGATTTTTAGGCTTATTTATGTGGGTGCACTCTTAAAAATAAAGGTTCTTTATTAGTATTGATGGTTCCATGAGATGGATTGGCATCCATGGAACCTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49956 True 290 lncRNA 0.44 1 6272938 6273227

Neighbor

gene id symbol gene type direction distance location
CI01000006_06267132_06269409 NA coding upstream 2881 6267132 ~ 6270057 (+)
CI01000006_06225846_06258303 MYO5B coding upstream 14423 6225846 ~ 6258515 (+)
CI01000006_06201072_06204390 CFAP53 coding upstream 68243 6201072 ~ 6204695 (+)
CI01000006_06192438_06193928 NA coding upstream 78934 6192438 ~ 6194004 (+)
CI01000006_06171151_06179449 PVRL1A coding upstream 91563 6171151 ~ 6181375 (+)
CI01000006_06289413_06296642 NA coding downstream 16072 6289299 ~ 6297106 (+)
CI01000006_06304760_06308641 SKP2 coding downstream 30952 6304179 ~ 6309263 (+)
CI01000006_06319924_06332207 NA coding downstream 46697 6319924 ~ 6332207 (+)
CI01000006_06432698_06437087 SLC35F2 coding downstream 158869 6432096 ~ 6437592 (+)
CI01000006_06438579_06447777 ELMOD1 coding downstream 165352 6438579 ~ 6449161 (+)
G43904 NA non-coding upstream 72969 6194169 ~ 6199969 (+)
G43908 NA non-coding upstream 118211 6151873 ~ 6154727 (+)
G43990 NA non-coding upstream 152203 6120358 ~ 6120735 (+)
G43988 NA non-coding upstream 162532 6110166 ~ 6110406 (+)
G43970 NA non-coding upstream 200232 6072397 ~ 6072706 (+)
G44010 NA non-coding downstream 1778 6275005 ~ 6275234 (+)
G44012 NA non-coding downstream 12421 6285648 ~ 6285875 (+)
G44035 NA non-coding downstream 114488 6387715 ~ 6390438 (+)
G44053 NA non-coding downstream 148703 6421930 ~ 6424506 (+)
G44072 NA non-coding downstream 198959 6472186 ~ 6472522 (+)
CI01000006_06122278_06122736 NA other upstream 144263 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 163350 6104927 ~ 6109820 (+)
G43896 NA other upstream 501163 5770089 ~ 5771775 (+)
G41996 NA other upstream 1148789 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 2536960 3734554 ~ 3736035 (+)
CI01000006_07167131_07168925 NA other downstream 893562 7166778 ~ 7168925 (+)
G44872 NA other downstream 1083125 7356352 ~ 7387884 (+)
G45178 NA other downstream 1348764 7607604 ~ 7683671 (+)
G45265 NA other downstream 1610640 7883867 ~ 7920355 (+)
G45336 NA other downstream 1746115 8019342 ~ 8021951 (+)

Expression


Co-expression Network