G44072


Basic Information

Item Value
gene id G44072
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6472186 ~ 6472522 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU50036
CAGATGGGTTTGGCTCCTTGTGAAAATGAATATCAAATCAATCAAAAAAAAACCCTGGTGCTTTGCAGGCCAGTACAGACCTGTGTGATAGGACAAAGTATTTTACCATCGAAAAATGACACTTCGGCTGTTAAATATGCATATAACTATCAAGCGCTTAAGAAAAAGAAAGCAAACCTGCACATTTGAATAATCATTAGGCTATTAGACAGGGCAGAGGAGGAGGAGGAGGAGGAAAGGACAAGTACGGACACCAGGGTAACGCTGCTGTGCAACTGCGTCATCTTGTCTAAATCAAGAACACTGAGGTAAAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50036 True 316 lncRNA 0.42 2 6472186 6472522

Neighbor

gene id symbol gene type direction distance location
CI01000006_06438579_06447777 ELMOD1 coding upstream 23025 6438579 ~ 6449161 (+)
CI01000006_06432698_06437087 SLC35F2 coding upstream 34594 6432096 ~ 6437592 (+)
CI01000006_06319924_06332207 NA coding upstream 139979 6319924 ~ 6332207 (+)
CI01000006_06304760_06308641 SKP2 coding upstream 162923 6304179 ~ 6309263 (+)
CI01000006_06289413_06296642 NA coding upstream 175080 6289299 ~ 6297106 (+)
CI01000006_06598608_06603726 WDR73 coding downstream 126026 6598548 ~ 6603830 (+)
CI01000006_06653186_06657164 NA coding downstream 180664 6653186 ~ 6657276 (+)
CI01000006_06658495_06666257 CHRDL2 coding downstream 185973 6658495 ~ 6666498 (+)
CI01000006_06790435_06791964 NA coding downstream 317588 6790110 ~ 6792805 (+)
CI01000006_06800620_06801564 NA coding downstream 327838 6800360 ~ 6801622 (+)
G44053 NA non-coding upstream 47680 6421930 ~ 6424506 (+)
G44035 NA non-coding upstream 81748 6387715 ~ 6390438 (+)
G44012 NA non-coding upstream 186311 6285648 ~ 6285875 (+)
G44010 NA non-coding upstream 196952 6275005 ~ 6275234 (+)
G44009 NA non-coding upstream 198959 6272938 ~ 6273227 (+)
G44074 NA non-coding downstream 665 6473187 ~ 6475341 (+)
G44136 NA non-coding downstream 175352 6647874 ~ 6650111 (+)
G44162 NA non-coding downstream 214797 6687319 ~ 6687577 (+)
G44164 NA non-coding downstream 215805 6688327 ~ 6688565 (+)
CI01000006_06122278_06122736 NA other upstream 343511 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 362598 6104927 ~ 6109820 (+)
G43896 NA other upstream 700411 5770089 ~ 5771775 (+)
G41996 NA other upstream 1348037 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 2736208 3734554 ~ 3736035 (+)
CI01000006_07167131_07168925 NA other downstream 694267 7166778 ~ 7168925 (+)
G44872 NA other downstream 883830 7356352 ~ 7387884 (+)
G45178 NA other downstream 1149469 7607604 ~ 7683671 (+)
G45265 NA other downstream 1411345 7883867 ~ 7920355 (+)
G45336 NA other downstream 1546820 8019342 ~ 8021951 (+)

Expression


Co-expression Network