G44210


Basic Information

Item Value
gene id G44210
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6848942 ~ 6849157 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU50206
ATCCATATACTGTTTGACATGACTGCTCTGCTGTACCTCCTTTCCGATGCAATCTGCACAACCTATTCATCCATCAATCATTTTATTTGGCCCTATGATTTGTTTTGATTAAATTTGTAGAGGTGGACATACTGTAATGTGAATTCATCAAGACCCTGCATATACACACACATGCATACATACTGATAAATGTATTAAAGTCATATATATTTAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50206 True 216 lncRNA 0.37 1 6848942 6849157

Neighbor

gene id symbol gene type direction distance location
CI01000006_06847369_06848340 OR133-1 coding upstream 231 6846954 ~ 6848711 (+)
CI01000006_06838948_06839904 NA coding upstream 8688 6838775 ~ 6840254 (+)
CI01000006_06825096_06826055 OR133-1 coding upstream 22490 6824949 ~ 6826452 (+)
CI01000006_06803516_06806038 NA coding upstream 42728 6803026 ~ 6806214 (+)
CI01000006_06800620_06801564 NA coding upstream 47320 6800360 ~ 6801622 (+)
CI01000006_06853100_06858970 OR133-7 coding downstream 3674 6852831 ~ 6859433 (+)
CI01000006_06898410_06913888 NECTIN3, PVRL3B coding downstream 49253 6898410 ~ 6913946 (+)
CI01000006_06955035_06961818 PPM1NB, PPM1N coding downstream 105878 6955035 ~ 6962205 (+)
CI01000006_06987083_06990215 NA coding downstream 137926 6987083 ~ 6990358 (+)
CI01000006_07066344_07070484 FTSJ1 coding downstream 217187 7066344 ~ 7071255 (+)
G44196 NA non-coding upstream 15672 6833001 ~ 6833270 (+)
G44180 NA non-coding upstream 81003 6767432 ~ 6767939 (+)
G44173 NA non-coding upstream 135471 6712699 ~ 6713471 (+)
G44164 NA non-coding upstream 160377 6688327 ~ 6688565 (+)
G44745 NA non-coding downstream 96498 6945655 ~ 6963524 (+)
G44755 NA non-coding downstream 121347 6970504 ~ 6970816 (+)
G44747 NA non-coding downstream 127241 6976398 ~ 6976884 (+)
G44780 NA non-coding downstream 143711 6992868 ~ 6995377 (+)
G44817 NA non-coding downstream 214364 7063521 ~ 7063784 (+)
CI01000006_06122278_06122736 NA other upstream 720267 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 739354 6104927 ~ 6109820 (+)
G43896 NA other upstream 1077167 5770089 ~ 5771775 (+)
G41996 NA other upstream 1724793 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 3112964 3734554 ~ 3736035 (+)
CI01000006_07167131_07168925 NA other downstream 317632 7166778 ~ 7168925 (+)
G44872 NA other downstream 507195 7356352 ~ 7387884 (+)
G45178 NA other downstream 772834 7607604 ~ 7683671 (+)
G45265 NA other downstream 1034710 7883867 ~ 7920355 (+)
G45336 NA other downstream 1170185 8019342 ~ 8021951 (+)

Expression


Co-expression Network