G44755


Basic Information

Item Value
gene id G44755
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6970504 ~ 6970816 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU50876
CAACAAAGTAGAAGGCCCCTGAGAAATCCCAGCGGGGCCTAAGTTTGTCCACACGGATCCCAGCCACAAAGGCCTCCTCATATTGCCTTAGCAGGACCTGCAGTGATTTCAGGTTTATGCTGTTTTGCTCTGTGAAGTTGGCCAACTGTTCCTCCCAGCGCTTGTGAGCCTGCAGCTCAGAGGGATGCTCGAGAGCGGAGAACACCACCGCCCCACACAGCAGGTAGAGGAGGATGAGGGCTGCCAACAAGCCAAAACGGGCATTGTCTTCATTCAGGTGCAGTGGGAGGCAACAGCTGTTGCTGACATCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50876 True 313 lncRNA 0.40 1 6970504 6970816

Neighbor

gene id symbol gene type direction distance location
CI01000006_06955035_06961818 PPM1NB, PPM1N coding upstream 8299 6955035 ~ 6962205 (+)
CI01000006_06898410_06913888 NECTIN3, PVRL3B coding upstream 56558 6898410 ~ 6913946 (+)
CI01000006_06853100_06858970 OR133-7 coding upstream 111071 6852831 ~ 6859433 (+)
CI01000006_06847369_06848340 OR133-1 coding upstream 121793 6846954 ~ 6848711 (+)
CI01000006_06838948_06839904 NA coding upstream 130250 6838775 ~ 6840254 (+)
CI01000006_06987083_06990215 NA coding downstream 16267 6987083 ~ 6990358 (+)
CI01000006_07066344_07070484 FTSJ1 coding downstream 95528 7066344 ~ 7071255 (+)
CI01000006_07072315_07073358 NA coding downstream 100852 7071668 ~ 7073411 (+)
CI01000006_07078406_07080719 NA coding downstream 106136 7076952 ~ 7080930 (+)
CI01000006_07121418_07160572 ANK1 coding downstream 150353 7121169 ~ 7160825 (+)
G44745 NA non-coding upstream 6980 6945655 ~ 6963524 (+)
G44210 NA non-coding upstream 121347 6848942 ~ 6849157 (+)
G44196 NA non-coding upstream 137234 6833001 ~ 6833270 (+)
G44180 NA non-coding upstream 202565 6767432 ~ 6767939 (+)
G44747 NA non-coding downstream 5582 6976398 ~ 6976884 (+)
G44780 NA non-coding downstream 22052 6992868 ~ 6995377 (+)
G44817 NA non-coding downstream 92705 7063521 ~ 7063784 (+)
G44818 NA non-coding downstream 93011 7063827 ~ 7064167 (+)
G44794 NA non-coding downstream 191664 7162480 ~ 7164707 (+)
CI01000006_06122278_06122736 NA other upstream 841829 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 860916 6104927 ~ 6109820 (+)
G43896 NA other upstream 1198729 5770089 ~ 5771775 (+)
G41996 NA other upstream 1846355 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 3234526 3734554 ~ 3736035 (+)
CI01000006_07167131_07168925 NA other downstream 195973 7166778 ~ 7168925 (+)
G44872 NA other downstream 385536 7356352 ~ 7387884 (+)
G45178 NA other downstream 651175 7607604 ~ 7683671 (+)
G45265 NA other downstream 913051 7883867 ~ 7920355 (+)
G45336 NA other downstream 1048526 8019342 ~ 8021951 (+)

Expression


Co-expression Network