G44818


Basic Information

Item Value
gene id G44818
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7063827 ~ 7064167 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU50945
ATTCAAGTACTTTACTATAGTATGGTTCAAAAACACTACAGTATTTACTGTAAATTACTATAGTATTTTTTCATGTGTTAGCATATCTGCTTATCAATATGTCATCCCTGAACATATATGCAATGTAATAAATACAAAAGGCGGAAAAAATCGTTCTTCATTTACCAGTCAAAATGTAACTGAGACAAGATGTTCATTGGTGAGGCGGTTTCTCTGTTTCCTCTTTATAGTGTTCACGGTTGATAATTTTTCGGATTTTCTAGACTATTTTAAGTCCTAAAGTGAGCAAGATATATTAAAATGTAGCGCATGGATTCGGCAGGTCTATTCGTGGGCAGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50945 True 341 lncRNA 0.34 1 7063827 7064167

Neighbor

gene id symbol gene type direction distance location
CI01000006_06987083_06990215 NA coding upstream 73469 6987083 ~ 6990358 (+)
CI01000006_06955035_06961818 PPM1NB, PPM1N coding upstream 101622 6955035 ~ 6962205 (+)
CI01000006_06898410_06913888 NECTIN3, PVRL3B coding upstream 149881 6898410 ~ 6913946 (+)
CI01000006_06853100_06858970 OR133-7 coding upstream 204394 6852831 ~ 6859433 (+)
CI01000006_06847369_06848340 OR133-1 coding upstream 215116 6846954 ~ 6848711 (+)
CI01000006_07066344_07070484 FTSJ1 coding downstream 2177 7066344 ~ 7071255 (+)
CI01000006_07072315_07073358 NA coding downstream 7501 7071668 ~ 7073411 (+)
CI01000006_07078406_07080719 NA coding downstream 12785 7076952 ~ 7080930 (+)
CI01000006_07121418_07160572 ANK1 coding downstream 57002 7121169 ~ 7160825 (+)
CI01000006_07167131_07168925 NA coding downstream 102611 7166778 ~ 7168925 (+)
G44817 NA non-coding upstream 43 7063521 ~ 7063784 (+)
G44780 NA non-coding upstream 68450 6992868 ~ 6995377 (+)
G44747 NA non-coding upstream 86943 6976398 ~ 6976884 (+)
G44755 NA non-coding upstream 93011 6970504 ~ 6970816 (+)
G44745 NA non-coding upstream 100303 6945655 ~ 6963524 (+)
G44794 NA non-coding downstream 98313 7162480 ~ 7164707 (+)
G44821 NA non-coding downstream 109050 7173217 ~ 7173447 (+)
G44793 NA non-coding downstream 158755 7222922 ~ 7312257 (+)
G44851 NA non-coding downstream 250658 7314825 ~ 7315134 (+)
G44852 NA non-coding downstream 251044 7315211 ~ 7315553 (+)
CI01000006_06122278_06122736 NA other upstream 935152 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 954239 6104927 ~ 6109820 (+)
G43896 NA other upstream 1292052 5770089 ~ 5771775 (+)
G41996 NA other upstream 1939678 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 3327849 3734554 ~ 3736035 (+)
G44872 NA other downstream 292185 7356352 ~ 7387884 (+)
G45178 NA other downstream 557824 7607604 ~ 7683671 (+)
G45265 NA other downstream 819700 7883867 ~ 7920355 (+)
G45336 NA other downstream 955175 8019342 ~ 8021951 (+)

Expression


Co-expression Network