G44821


Basic Information

Item Value
gene id G44821
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7173217 ~ 7173447 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU50948
GAAAATAGGGGAAGTAATTTTGTTTCTATGTCTTTTCATTCTATCAGAAGAACATAAATAGTAATTATGTCATTGGAAATCTCCACATTATTGTAACAGCAACATTTTATGACATGTTACCGCATCATTTGGATGCTTGACTTTACAAATTAGCCTGTTATGACAAGTCTTGTAGATGTTTACCGACTCCAGGTTAGCAAGGTTAAGGCCTATAGGCTATGTGATCAATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50948 True 231 lncRNA 0.34 1 7173217 7173447

Neighbor

gene id symbol gene type direction distance location
CI01000006_07167131_07168925 NA coding upstream 4292 7166778 ~ 7168925 (+)
CI01000006_07121418_07160572 ANK1 coding upstream 12392 7121169 ~ 7160825 (+)
CI01000006_07078406_07080719 NA coding upstream 92287 7076952 ~ 7080930 (+)
CI01000006_07072315_07073358 NA coding upstream 99806 7071668 ~ 7073411 (+)
CI01000006_07066344_07070484 FTSJ1 coding upstream 101962 7066344 ~ 7071255 (+)
CI01000006_07194003_07196123 NA coding downstream 20275 7193722 ~ 7196355 (+)
CI01000006_07203185_07207649 NA coding downstream 29738 7203185 ~ 7207660 (+)
CI01000006_07208843_07212249 RGS7BPB coding downstream 35033 7208480 ~ 7212838 (+)
CI01000006_07214841_07222648 C6 coding downstream 41394 7214841 ~ 7222817 (+)
CI01000006_07243073_07247934 GHR coding downstream 69626 7243073 ~ 7248022 (+)
G44794 NA non-coding upstream 8510 7162480 ~ 7164707 (+)
G44818 NA non-coding upstream 109050 7063827 ~ 7064167 (+)
G44817 NA non-coding upstream 109433 7063521 ~ 7063784 (+)
G44780 NA non-coding upstream 177840 6992868 ~ 6995377 (+)
G44747 NA non-coding upstream 196333 6976398 ~ 6976884 (+)
G44793 NA non-coding downstream 49475 7222922 ~ 7312257 (+)
G44851 NA non-coding downstream 141378 7314825 ~ 7315134 (+)
G44852 NA non-coding downstream 141764 7315211 ~ 7315553 (+)
G44853 NA non-coding downstream 142274 7315721 ~ 7315980 (+)
G44854 NA non-coding downstream 142724 7316171 ~ 7316492 (+)
CI01000006_06122278_06122736 NA other upstream 1044542 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 1063629 6104927 ~ 6109820 (+)
G43896 NA other upstream 1401442 5770089 ~ 5771775 (+)
G41996 NA other upstream 2049068 5117206 ~ 5124149 (+)
G44872 NA other downstream 182905 7356352 ~ 7387884 (+)
G45178 NA other downstream 448544 7607604 ~ 7683671 (+)
G45265 NA other downstream 710420 7883867 ~ 7920355 (+)
G45336 NA other downstream 845895 8019342 ~ 8021951 (+)
CI01000006_08198328_08199463 NA other downstream 986069 8197881 ~ 8200145 (+)

Expression


Co-expression Network