Gene
RNA
| Item | Value |
|---|---|
| gene id | G44976 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 7173508 ~ 7173810 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU51128 | True | 303 | lncRNA | 0.34 | 1 | 7173508 | 7173810 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_07170860_07172808 | NDR1 | coding | downstream | 616 | 7170624 ~ 7172892 (-) |
| CI01000006_07032358_07058942 | RICTORB, RICTOR | coding | downstream | 114566 | 7031186 ~ 7058942 (-) |
| CI01000006_07017274_07027795 | NA | coding | downstream | 144701 | 7017096 ~ 7028807 (-) |
| CI01000006_07009672_07015471 | CCDC61 | coding | downstream | 158037 | 7008881 ~ 7015471 (-) |
| CI01000006_07001011_07007919 | ITPKCA | coding | downstream | 164769 | 6999908 ~ 7008739 (-) |
| CI01000006_07200554_07201795 | HTR1AB, HTR1A | coding | upstream | 26501 | 7200311 ~ 7201898 (-) |
| CI01000006_07223113_07228278 | C7B, C7 | coding | upstream | 49197 | 7223007 ~ 7228278 (-) |
| CI01000006_07231215_07235809 | OXCT1.L, OXCT1B, OXCT1, OXCT1A | coding | upstream | 57299 | 7231109 ~ 7235809 (-) |
| CI01000006_07312005_07327873 | EFNA5A | coding | upstream | 137983 | 7311793 ~ 7327901 (-) |
| CI01000006_07358910_07359982 | NA | coding | upstream | 184542 | 7358352 ~ 7360452 (-) |
| G44975 | NA | non-coding | downstream | 1072 | 7172078 ~ 7172436 (-) |
| G44974 | NA | non-coding | downstream | 13063 | 7159454 ~ 7160445 (-) |
| G44958 | NA | non-coding | downstream | 20474 | 7104875 ~ 7153034 (-) |
| G44966 | NA | non-coding | downstream | 45226 | 7126349 ~ 7128282 (-) |
| G44947 | NA | non-coding | downstream | 47207 | 7078218 ~ 7126301 (-) |
| G44997 | NA | non-coding | upstream | 17499 | 7191309 ~ 7191521 (-) |
| G45000 | NA | non-coding | upstream | 23206 | 7197016 ~ 7197217 (-) |
| G45001 | NA | non-coding | upstream | 23602 | 7197412 ~ 7197629 (-) |
| G45002 | NA | non-coding | upstream | 24012 | 7197822 ~ 7198027 (-) |
| G45052 | NA | non-coding | upstream | 147790 | 7321600 ~ 7322103 (-) |
| CI01000006_06974359_06976736 | NA | other | downstream | 196636 | 6973224 ~ 6976872 (-) |
| CI01000006_04560607_04560993 | NA | other | downstream | 2611440 | 4559509 ~ 4562068 (-) |
| G43549 | NA | other | downstream | 2818080 | 4352510 ~ 4355428 (-) |
| G43102 | NA | other | downstream | 4239524 | 2908451 ~ 2933984 (-) |
| CI01000006_02624725_02626124 | COX8A | other | downstream | 4547322 | 2624436 ~ 2626776 (-) |
| CI01000006_07500281_07507754 | NA | other | upstream | 329335 | 7500246 ~ 7507976 (-) |
| CI01000006_10453630_10483241 | NA | other | upstream | 3309046 | 10453613 ~ 10484006 (-) |
| G47658 | NA | other | upstream | 3857101 | 11030911 ~ 11033127 (-) |
| CI01000006_11651067_11653761 | SMD3, SNRPD3, SNRPD3L, MGC52856 | other | upstream | 4476553 | 11650363 ~ 11654424 (-) |
| CI01000006_12348300_12348961 | GLRX | other | upstream | 5160599 | 12347180 ~ 12349383 (-) |
