Gene
RNA
| Item | Value |
|---|---|
| gene id | G45000 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 7197016 ~ 7197217 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU51155 | True | 202 | lncRNA | 0.33 | 1 | 7197016 | 7197217 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_07170860_07172808 | NDR1 | coding | downstream | 24124 | 7170624 ~ 7172892 (-) |
| CI01000006_07032358_07058942 | RICTORB, RICTOR | coding | downstream | 138074 | 7031186 ~ 7058942 (-) |
| CI01000006_07017274_07027795 | NA | coding | downstream | 168209 | 7017096 ~ 7028807 (-) |
| CI01000006_07009672_07015471 | CCDC61 | coding | downstream | 181545 | 7008881 ~ 7015471 (-) |
| CI01000006_07001011_07007919 | ITPKCA | coding | downstream | 188277 | 6999908 ~ 7008739 (-) |
| CI01000006_07200554_07201795 | HTR1AB, HTR1A | coding | upstream | 3094 | 7200311 ~ 7201898 (-) |
| CI01000006_07223113_07228278 | C7B, C7 | coding | upstream | 25790 | 7223007 ~ 7228278 (-) |
| CI01000006_07231215_07235809 | OXCT1.L, OXCT1B, OXCT1, OXCT1A | coding | upstream | 33892 | 7231109 ~ 7235809 (-) |
| CI01000006_07312005_07327873 | EFNA5A | coding | upstream | 114576 | 7311793 ~ 7327901 (-) |
| CI01000006_07358910_07359982 | NA | coding | upstream | 161135 | 7358352 ~ 7360452 (-) |
| G44997 | NA | non-coding | downstream | 5495 | 7191309 ~ 7191521 (-) |
| G44976 | NA | non-coding | downstream | 23206 | 7173508 ~ 7173810 (-) |
| G44975 | NA | non-coding | downstream | 24580 | 7172078 ~ 7172436 (-) |
| G44974 | NA | non-coding | downstream | 36571 | 7159454 ~ 7160445 (-) |
| G44958 | NA | non-coding | downstream | 43982 | 7104875 ~ 7153034 (-) |
| G45001 | NA | non-coding | upstream | 195 | 7197412 ~ 7197629 (-) |
| G45002 | NA | non-coding | upstream | 605 | 7197822 ~ 7198027 (-) |
| G45052 | NA | non-coding | upstream | 124383 | 7321600 ~ 7322103 (-) |
| G45053 | NA | non-coding | upstream | 125270 | 7322487 ~ 7322750 (-) |
| G45054 | NA | non-coding | upstream | 127624 | 7324841 ~ 7325215 (-) |
| CI01000006_06974359_06976736 | NA | other | downstream | 220144 | 6973224 ~ 6976872 (-) |
| CI01000006_04560607_04560993 | NA | other | downstream | 2634948 | 4559509 ~ 4562068 (-) |
| G43549 | NA | other | downstream | 2841588 | 4352510 ~ 4355428 (-) |
| G43102 | NA | other | downstream | 4263032 | 2908451 ~ 2933984 (-) |
| CI01000006_02624725_02626124 | COX8A | other | downstream | 4570830 | 2624436 ~ 2626776 (-) |
| CI01000006_07500281_07507754 | NA | other | upstream | 305928 | 7500246 ~ 7507976 (-) |
| CI01000006_10453630_10483241 | NA | other | upstream | 3285639 | 10453613 ~ 10484006 (-) |
| G47658 | NA | other | upstream | 3833694 | 11030911 ~ 11033127 (-) |
| CI01000006_11651067_11653761 | SMD3, SNRPD3, SNRPD3L, MGC52856 | other | upstream | 4453146 | 11650363 ~ 11654424 (-) |
| CI01000006_12348300_12348961 | GLRX | other | upstream | 5137192 | 12347180 ~ 12349383 (-) |
