Gene
RNA
| Item | Value |
|---|---|
| gene id | G45053 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 7322487 ~ 7322750 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU51208 | True | 264 | lncRNA | 0.39 | 1 | 7322487 | 7322750 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_07231215_07235809 | OXCT1.L, OXCT1B, OXCT1, OXCT1A | coding | downstream | 86678 | 7231109 ~ 7235809 (-) |
| CI01000006_07223113_07228278 | C7B, C7 | coding | downstream | 94209 | 7223007 ~ 7228278 (-) |
| CI01000006_07200554_07201795 | HTR1AB, HTR1A | coding | downstream | 120589 | 7200311 ~ 7201898 (-) |
| CI01000006_07170860_07172808 | NDR1 | coding | downstream | 149595 | 7170624 ~ 7172892 (-) |
| CI01000006_07032358_07058942 | RICTORB, RICTOR | coding | downstream | 263545 | 7031186 ~ 7058942 (-) |
| CI01000006_07358910_07359982 | NA | coding | upstream | 35602 | 7358352 ~ 7360452 (-) |
| CI01000006_07444688_07448103 | NA | coding | upstream | 121839 | 7444589 ~ 7448103 (-) |
| CI01000006_07449425_07454936 | NA | coding | upstream | 126675 | 7449425 ~ 7455306 (-) |
| CI01000006_07456715_07457332 | HSPB11 | coding | upstream | 133713 | 7456463 ~ 7457379 (-) |
| CI01000006_07463938_07471236 | PDE6B | coding | upstream | 140440 | 7463190 ~ 7472462 (-) |
| G45052 | NA | non-coding | downstream | 384 | 7321600 ~ 7322103 (-) |
| G45002 | NA | non-coding | downstream | 124460 | 7197822 ~ 7198027 (-) |
| G45001 | NA | non-coding | downstream | 124858 | 7197412 ~ 7197629 (-) |
| G45000 | NA | non-coding | downstream | 125270 | 7197016 ~ 7197217 (-) |
| G44997 | NA | non-coding | downstream | 130966 | 7191309 ~ 7191521 (-) |
| G45054 | NA | non-coding | upstream | 2091 | 7324841 ~ 7325215 (-) |
| G45055 | NA | non-coding | upstream | 2703 | 7325453 ~ 7325678 (-) |
| CI01000006_07312005_07327873 | EFNA5A | non-coding | upstream | 3477 | 7311793 ~ 7327901 (-) |
| G45077 | NA | non-coding | upstream | 82034 | 7404784 ~ 7405053 (-) |
| G45078 | NA | non-coding | upstream | 82399 | 7405149 ~ 7405447 (-) |
| CI01000006_06974359_06976736 | NA | other | downstream | 345615 | 6973224 ~ 6976872 (-) |
| CI01000006_04560607_04560993 | NA | other | downstream | 2760419 | 4559509 ~ 4562068 (-) |
| G43549 | NA | other | downstream | 2967059 | 4352510 ~ 4355428 (-) |
| G43102 | NA | other | downstream | 4388503 | 2908451 ~ 2933984 (-) |
| CI01000006_02624725_02626124 | COX8A | other | downstream | 4696301 | 2624436 ~ 2626776 (-) |
| CI01000006_07500281_07507754 | NA | other | upstream | 180395 | 7500246 ~ 7507976 (-) |
| CI01000006_10453630_10483241 | NA | other | upstream | 3160106 | 10453613 ~ 10484006 (-) |
| G47658 | NA | other | upstream | 3708161 | 11030911 ~ 11033127 (-) |
| CI01000006_11651067_11653761 | SMD3, SNRPD3, SNRPD3L, MGC52856 | other | upstream | 4327613 | 11650363 ~ 11654424 (-) |
| CI01000006_12348300_12348961 | GLRX | other | upstream | 5011659 | 12347180 ~ 12349383 (-) |
