G44872


Basic Information

Item Value
gene id G44872
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7356352 ~ 7387884 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU51004
CCGAAATGCATCAGTTATCATCAAAAAGTTCAGAGAGGATGAGCGATCGCTGTGATGACTCAAGCGTGAATTCGTAAAATGAATATAAGAATGGTTAACTTTAATTTAAAAAAGAGACACTCCCAGAATTCACTCAGAGACGCAATCATGACAGTTTATTAGCGTAACGCAAGAACTGAGTGCAGAAGGAAGGGGGCCAGGCACCTCTCTGTGTGTTAGGGGTCATCAAACAGCAGGATGTTCTAGTTACCCCGCAGGAGAACTTTCTCTCTGCTGGAATGAGTCTTCTGATACCCCAAATCTTTTGAGAGCGCCAGCACACTGCCACACAGCCCTGGAGGGTTAATCGGGATGGGGCGCGATTGTGGGACTCAAACCAAGAGGCCTGCGGTTCCCATCTGTAACTCTTTCCACCCTTTAGTCGGTCTATATTTCCTTCGACAAGCCCTGCTGTATGCACTTCCTGCGTGTAAGAGCCTAAATACTTTAAACTCTGGCAAAGATCCACTAAGACAGGAACAATGGCACCCTTTCACGTGAGCTGAGAGAAGACAGAGGTCTTCAGACCAGTCAATATTTGGACATGATCCCCCCACCCTCCTCCATTTAAAAATCCAAGCGGAACCATGCACCAGGAGGCCAGAAGTGCCAGCAAGGGAAAAAGAGGGTAAACACGCAGAACAATACAAACTGAACCCTACACAATAGCACCGAACAGCTATCACAATATCAACTGGCCACAAACCACAAACCATGGGCTTTGTTTTTAAAGTGGGGATTAAAACTGAGCCGGCACAAAAAGGAAACCATTTGAGGTCATATTGCGCAAGCTAGAGTTAAGAGGTGAAAAAGAGACGGCTTTACAGGAGATCCATGACATTTCCCATTTCTGTAGTGAAGAAATGAGCAGAGAAAGACAACCTAGAAAGCGTTTAAGTGTGAAATGTTACAAAAAACCTAAAGAGGCAGAGCATACTACTAACTACACCACCAGACTGAGAAGGCTTCAAAAACTGTAGGAAATGTGCCACATCTGTTATTGAGAGATTTGAGAGGCATTATCAGTGATTAAAACGGGACTCCGTCAGAATGCTGAAATCCCTCTTCCCAGCTGTTAGGTCCATTCGACAGACCTCTTTGATGGACAGCGGTATCGGCTTCCATGGCACCACATACACAAACAGCCAGAAGATTAAGGGAATGACGTTGCCGTCTGCGTCCGCCGTCCAGGGTTCAGACCACCGCTTGGCGTTTCAGCTTGAGCGATCACCATTAAACTCATTTCAGAGTAGACAGCAGATGTGCAGGTGGAGCCGTGCACAGGAGGACTTTGTGTTACGAGATGGAAGACGTGGAAGAGGGGTGCCAACAAGAACAGAGGCAAAGCCAAAAAACATCTGTAAGCATATGCTAAAATGGTGACGATTACGGGGTGTATTAGTCATATTAAGCTCATATACATATATTAAAAAGTTCCCTGTTGTTAGAAAAATATAGAGGTTAGAAACGGAGACGGAGCAGTAGAAAAACAGAAACTATTCAGCACATAATAAATGCATGATTTTATATAATTGATGTCAATATTCTTCAAGCATTTTGTTTTTGTCTCCACAGCTTGAGAGTAATGCACTAATGTTGTTTAAAATGCAGTGTGCTGAAGTTATTAAATATGGGCGAATACAAAATGCTTATGTTCACTCAGATAGTCAAATGCAATTAAAGTGTTTAAGTAGGAATGTAACACACGCAAGTGGTTTAAAGACAAAATTCCTTTATCTTTCATTTCATATTATAATCACAGTTCTTCCTTTTCATATATGCTTCTATTTTCTAAATTTGATTTACAAGTGCTCTGCATCTCAATTTTGCCACAGGCGGGTCTTTGACCCTAAGTAGGATTCCTTCATGCCAATGTGAGCCAATTATATTTTGTATTTTATATTTATCTGTTTAGAGCAAAAAATTACACTGAAAAGAAGCTGCATCAAATTAAAGCAGGAATCACAATCACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51004 True 2013 TUCP 0.26 2 7356352 7387884

Neighbor

gene id symbol gene type direction distance location
CI01000006_07328380_07352585 NA coding upstream 3215 7327983 ~ 7353137 (+)
CI01000006_07254728_07260352 NA coding upstream 95918 7254261 ~ 7260434 (+)
CI01000006_07249033_07250723 NA coding upstream 105457 7248438 ~ 7250895 (+)
CI01000006_07243073_07247934 GHR coding upstream 108330 7243073 ~ 7248022 (+)
CI01000006_07214841_07222648 C6 coding upstream 133535 7214841 ~ 7222817 (+)
CI01000006_07458458_07460310 ATP5I, ATP5IA coding downstream 70229 7458113 ~ 7460310 (+)
CI01000006_07477200_07478617 RBP4L coding downstream 89044 7476928 ~ 7478786 (+)
CI01000006_07486574_07490054 SLC26A1 coding downstream 98094 7485978 ~ 7490576 (+)
CI01000006_07492187_07498391 NA coding downstream 104303 7492187 ~ 7498674 (+)
CI01000006_07577082_07582303 DUSP4 coding downstream 188514 7576398 ~ 7582313 (+)
G44859 NA non-coding upstream 30410 7325698 ~ 7325942 (+)
G44850 NA non-coding upstream 35657 7320374 ~ 7320695 (+)
G44857 NA non-coding upstream 36029 7320068 ~ 7320323 (+)
G44856 NA non-coding upstream 36419 7319715 ~ 7319933 (+)
G44855 NA non-coding upstream 38054 7318083 ~ 7318298 (+)
G45116 NA non-coding downstream 84818 7472702 ~ 7472906 (+)
G45120 NA non-coding downstream 91425 7479309 ~ 7479512 (+)
G45122 NA non-coding downstream 93805 7481689 ~ 7481888 (+)
G45134 NA non-coding downstream 133274 7521158 ~ 7522043 (+)
CI01000006_07167131_07168925 NA other upstream 185818 7166778 ~ 7168925 (+)
CI01000006_06122278_06122736 NA other upstream 1227677 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 1246764 6104927 ~ 6109820 (+)
G43896 NA other upstream 1584577 5770089 ~ 5771775 (+)
G41996 NA other upstream 2232203 5117206 ~ 5124149 (+)
G45178 NA other downstream 234107 7607604 ~ 7683671 (+)
G45265 NA other downstream 495983 7883867 ~ 7920355 (+)
G45336 NA other downstream 631458 8019342 ~ 8021951 (+)
CI01000006_08198328_08199463 NA other downstream 771632 8197881 ~ 8200145 (+)
G45355 NA other downstream 821671 8209555 ~ 8212388 (+)

Expression


Co-expression Network