Gene
RNA
| Item | Value |
|---|---|
| gene id | G45828 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 7501585 ~ 7501933 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU52120 | True | 349 | lncRNA | 0.39 | 1 | 7501585 | 7501933 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_07463938_07471236 | PDE6B | coding | downstream | 29123 | 7463190 ~ 7472462 (-) |
| CI01000006_07456715_07457332 | HSPB11 | coding | downstream | 44206 | 7456463 ~ 7457379 (-) |
| CI01000006_07449425_07454936 | NA | coding | downstream | 46279 | 7449425 ~ 7455306 (-) |
| CI01000006_07444688_07448103 | NA | coding | downstream | 53482 | 7444589 ~ 7448103 (-) |
| CI01000006_07358910_07359982 | NA | coding | downstream | 141133 | 7358352 ~ 7360452 (-) |
| CI01000006_07522441_07525197 | NA | coding | upstream | 19116 | 7521049 ~ 7525813 (-) |
| CI01000006_07586562_07627355 | NA | coding | upstream | 83089 | 7585022 ~ 7628448 (-) |
| CI01000006_07636757_07648169 | NA | coding | upstream | 134760 | 7636693 ~ 7649325 (-) |
| CI01000006_07658119_07685010 | NA | coding | upstream | 155235 | 7657168 ~ 7686169 (-) |
| CI01000006_07731668_07752706 | CCDC80L2 | coding | upstream | 229727 | 7731660 ~ 7754105 (-) |
| G45811 | NA | non-coding | downstream | 28609 | 7472582 ~ 7472976 (-) |
| G45078 | NA | non-coding | downstream | 96138 | 7405149 ~ 7405447 (-) |
| G45077 | NA | non-coding | downstream | 96532 | 7404784 ~ 7405053 (-) |
| CI01000006_07312005_07327873 | EFNA5A | non-coding | downstream | 174994 | 7311793 ~ 7327901 (-) |
| G45055 | NA | non-coding | downstream | 175907 | 7325453 ~ 7325678 (-) |
| G45841 | NA | non-coding | upstream | 40655 | 7542588 ~ 7542802 (-) |
| G45848 | NA | non-coding | upstream | 55131 | 7557064 ~ 7557299 (-) |
| G45849 | NA | non-coding | upstream | 56169 | 7558102 ~ 7558322 (-) |
| G45852 | NA | non-coding | upstream | 61380 | 7563313 ~ 7563719 (-) |
| CI01000006_06974359_06976736 | NA | other | downstream | 524713 | 6973224 ~ 6976872 (-) |
| CI01000006_04560607_04560993 | NA | other | downstream | 2939517 | 4559509 ~ 4562068 (-) |
| G43549 | NA | other | downstream | 3146157 | 4352510 ~ 4355428 (-) |
| G43102 | NA | other | downstream | 4567601 | 2908451 ~ 2933984 (-) |
| CI01000006_02624725_02626124 | COX8A | other | downstream | 4875399 | 2624436 ~ 2626776 (-) |
| CI01000006_07500281_07507754 | NA | other | upstream | 1212 | 7500246 ~ 7507976 (-) |
| CI01000006_10453630_10483241 | NA | other | upstream | 2980923 | 10453613 ~ 10484006 (-) |
| G47658 | NA | other | upstream | 3528978 | 11030911 ~ 11033127 (-) |
| CI01000006_11651067_11653761 | SMD3, SNRPD3, SNRPD3L, MGC52856 | other | upstream | 4148430 | 11650363 ~ 11654424 (-) |
| CI01000006_12348300_12348961 | GLRX | other | upstream | 4832476 | 12347180 ~ 12349383 (-) |
