G45148


Basic Information

Item Value
gene id G45148
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7543813 ~ 7544069 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU51309
ACGTAAACTGTATGTTCTCAATTGATATTGTTCATTGAAGCTTATTTATTATATAGAAGAGTATTGTGAGAAAGAGATCGAGTGAGCGAGTTTATTACCTGCATTCAGATTTAGCATTTTCCTTCAGGTCAGTCCTATGTTCATAATAAAAAATCTGTTTAAATGACCAATGTATTATCTTGTCCTTTTAACAGTTAAGGGGTTTTCCCGTGACTGACAGCGCTAGTCAAAGCATTTGTCAGTTGCATCTTGTTCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51309 True 257 lncRNA 0.38 1 7543813 7544069

Neighbor

gene id symbol gene type direction distance location
CI01000006_07492187_07498391 NA coding upstream 45139 7492187 ~ 7498674 (+)
CI01000006_07486574_07490054 SLC26A1 coding upstream 53237 7485978 ~ 7490576 (+)
CI01000006_07477200_07478617 RBP4L coding upstream 65027 7476928 ~ 7478786 (+)
CI01000006_07458458_07460310 ATP5I, ATP5IA coding upstream 83503 7458113 ~ 7460310 (+)
CI01000006_07328380_07352585 NA coding upstream 190676 7327983 ~ 7353137 (+)
CI01000006_07577082_07582303 DUSP4 coding downstream 32329 7576398 ~ 7582313 (+)
CI01000006_07692311_07693192 PPP1R3B coding downstream 148171 7692240 ~ 7694117 (+)
CI01000006_07694812_07698078 ERI1 coding downstream 150743 7694812 ~ 7698434 (+)
CI01000006_07699736_07726659 MFHAS1 coding downstream 155667 7699736 ~ 7726997 (+)
CI01000006_07757777_07795187 NNT.L, NNT coding downstream 213457 7757526 ~ 7795258 (+)
G45146 NA non-coding upstream 1955 7541654 ~ 7541858 (+)
G45136 NA non-coding upstream 20183 7523397 ~ 7523630 (+)
G45135 NA non-coding upstream 21195 7522243 ~ 7522618 (+)
G45134 NA non-coding upstream 21770 7521158 ~ 7522043 (+)
G45122 NA non-coding upstream 61925 7481689 ~ 7481888 (+)
G45151 NA non-coding downstream 5730 7549799 ~ 7550010 (+)
G45154 NA non-coding downstream 10028 7554097 ~ 7554334 (+)
G45174 NA non-coding downstream 53311 7597380 ~ 7597757 (+)
G45175 NA non-coding downstream 54124 7598193 ~ 7598590 (+)
G45132 NA non-coding downstream 54767 7598836 ~ 7599365 (+)
G44872 NA other upstream 155929 7356352 ~ 7387884 (+)
CI01000006_07167131_07168925 NA other upstream 373279 7166778 ~ 7168925 (+)
CI01000006_06122278_06122736 NA other upstream 1415138 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 1434225 6104927 ~ 6109820 (+)
G43896 NA other upstream 1772038 5770089 ~ 5771775 (+)
G45178 NA other downstream 77922 7607604 ~ 7683671 (+)
G45265 NA other downstream 339798 7883867 ~ 7920355 (+)
G45336 NA other downstream 475273 8019342 ~ 8021951 (+)
CI01000006_08198328_08199463 NA other downstream 615447 8197881 ~ 8200145 (+)
G45355 NA other downstream 665486 8209555 ~ 8212388 (+)

Expression


Co-expression Network