Gene
RNA
| Item | Value |
|---|---|
| gene id | G45848 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 7557064 ~ 7557299 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU52140 | True | 236 | lncRNA | 0.38 | 1 | 7557064 | 7557299 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_07522441_07525197 | NA | coding | downstream | 31251 | 7521049 ~ 7525813 (-) |
| CI01000006_07500281_07507754 | NA | coding | downstream | 49088 | 7500246 ~ 7507976 (-) |
| CI01000006_07463938_07471236 | PDE6B | coding | downstream | 84602 | 7463190 ~ 7472462 (-) |
| CI01000006_07456715_07457332 | HSPB11 | coding | downstream | 99685 | 7456463 ~ 7457379 (-) |
| CI01000006_07449425_07454936 | NA | coding | downstream | 101758 | 7449425 ~ 7455306 (-) |
| CI01000006_07586562_07627355 | NA | coding | upstream | 27723 | 7585022 ~ 7628448 (-) |
| CI01000006_07636757_07648169 | NA | coding | upstream | 79394 | 7636693 ~ 7649325 (-) |
| CI01000006_07658119_07685010 | NA | coding | upstream | 99869 | 7657168 ~ 7686169 (-) |
| CI01000006_07731668_07752706 | CCDC80L2 | coding | upstream | 174361 | 7731660 ~ 7754105 (-) |
| CI01000006_07836338_07852081 | FGF10A | coding | upstream | 278319 | 7835618 ~ 7852081 (-) |
| G45841 | NA | non-coding | downstream | 14262 | 7542588 ~ 7542802 (-) |
| G45828 | NA | non-coding | downstream | 55131 | 7501585 ~ 7501933 (-) |
| G45811 | NA | non-coding | downstream | 84088 | 7472582 ~ 7472976 (-) |
| G45078 | NA | non-coding | downstream | 151617 | 7405149 ~ 7405447 (-) |
| G45849 | NA | non-coding | upstream | 803 | 7558102 ~ 7558322 (-) |
| G45852 | NA | non-coding | upstream | 6014 | 7563313 ~ 7563719 (-) |
| G45855 | NA | non-coding | upstream | 8574 | 7565873 ~ 7566073 (-) |
| G45857 | NA | non-coding | upstream | 11868 | 7569167 ~ 7569390 (-) |
| G45813 | NA | non-coding | upstream | 19610 | 7576909 ~ 7583682 (-) |
| CI01000006_06974359_06976736 | NA | other | downstream | 580192 | 6973224 ~ 6976872 (-) |
| CI01000006_04560607_04560993 | NA | other | downstream | 2994996 | 4559509 ~ 4562068 (-) |
| G43549 | NA | other | downstream | 3201636 | 4352510 ~ 4355428 (-) |
| G43102 | NA | other | downstream | 4623080 | 2908451 ~ 2933984 (-) |
| CI01000006_10453630_10483241 | NA | other | upstream | 2925557 | 10453613 ~ 10484006 (-) |
| G47658 | NA | other | upstream | 3473612 | 11030911 ~ 11033127 (-) |
| CI01000006_11651067_11653761 | SMD3, SNRPD3, SNRPD3L, MGC52856 | other | upstream | 4093064 | 11650363 ~ 11654424 (-) |
| CI01000006_12348300_12348961 | GLRX | other | upstream | 4777110 | 12347180 ~ 12349383 (-) |
| CI01000006_12569291_12581457 | CELL, CEL.2, CEL.1 | other | upstream | 4793460 | 12569205 ~ 12582487 (-) |
