Gene
RNA
| Item | Value |
|---|---|
| gene id | G39331 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 220144 ~ 228257 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU53006 | True | 366 | lncRNA | 0.52 | 2 | 220144 | 228257 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103033866 | mark1,LOC108271264,LOC108411950 | coding | upstream | 140114 | 32499 ~ 80030 (+) |
| ptk7 | ptk7,LOC108411955,LOC107698238 | coding | upstream | 196273 | 506 ~ 23871 (+) |
| wwtr1 | wwtr1 | coding | downstream | 69010 | 297267 ~ 380545 (+) |
| LOC103032290 | LOC108439433,LOC108271171 | coding | downstream | 189111 | 417368 ~ 447315 (+) |
| LOC103032607 | LOC108439442 | coding | downstream | 233223 | 461480 ~ 471204 (+) |
| cp | cp,LOC100533122 | coding | downstream | 251015 | 479272 ~ 533627 (+) |
| LOC103036425 | pax6,LOC103036425,LOC108444445 | coding | downstream | 389900 | 618157 ~ 637895 (+) |
| G39327 | NA | non-coding | upstream | 37304 | 174825 ~ 182840 (+) |
| G39322 | NA | non-coding | upstream | 65856 | 153892 ~ 154288 (+) |
| G39284 | NA | non-coding | upstream | 175926 | 43855 ~ 44218 (+) |
| LOC111192488 | NA | non-coding | downstream | 20516 | 248773 ~ 255441 (+) |
| G39346 | NA | non-coding | downstream | 66442 | 294699 ~ 295077 (+) |
| G39347 | NA | non-coding | downstream | 66912 | 295169 ~ 295569 (+) |
| G39352 | NA | non-coding | downstream | 140886 | 369143 ~ 369781 (+) |
| G39349 | NA | non-coding | downstream | 182878 | 411135 ~ 412188 (+) |
| commd2 | commd2 | other | downstream | 53328 | 281585 ~ 291022 (+) |
| plekho2 | NA | other | downstream | 694500 | 922757 ~ 963284 (+) |
| pdcd7 | NA | other | downstream | 810316 | 1038573 ~ 1045347 (+) |
| G39619 | mrpl21 | other | downstream | 978530 | 1206787 ~ 1209096 (+) |
| G39626 | NA | other | downstream | 991549 | 1219806 ~ 1220486 (+) |
