Gene
RNA
| Item | Value |
|---|---|
| gene id | G45960 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 7930402 ~ 7930694 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU52270 | True | 261 | lncRNA | 0.26 | 2 | 7930402 | 7930694 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_07879567_07902271 | RAI14 | coding | downstream | 28131 | 7879528 ~ 7902271 (-) |
| CI01000006_07836338_07852081 | FGF10A | coding | downstream | 78321 | 7835618 ~ 7852081 (-) |
| CI01000006_07731668_07752706 | CCDC80L2 | coding | downstream | 176297 | 7731660 ~ 7754105 (-) |
| CI01000006_07658119_07685010 | NA | coding | downstream | 244233 | 7657168 ~ 7686169 (-) |
| CI01000006_07636757_07648169 | NA | coding | downstream | 281077 | 7636693 ~ 7649325 (-) |
| CI01000006_07942201_07958652 | SLC45A2 | coding | upstream | 11483 | 7942177 ~ 7958652 (-) |
| CI01000006_07960990_07974726 | AMACR | coding | upstream | 30266 | 7960960 ~ 7975623 (-) |
| CI01000006_07997158_07999906 | NA | coding | upstream | 64730 | 7995424 ~ 8000113 (-) |
| CI01000006_08002867_08008150 | HPSE | coding | upstream | 71928 | 8002622 ~ 8008200 (-) |
| CI01000006_08009529_08018597 | HELQ | coding | upstream | 78835 | 8009529 ~ 8018597 (-) |
| G45928 | NA | non-coding | downstream | 97806 | 7831145 ~ 7832596 (-) |
| G45903 | NA | non-coding | downstream | 127653 | 7802534 ~ 7802749 (-) |
| G45902 | NA | non-coding | downstream | 130281 | 7799869 ~ 7800121 (-) |
| G45868 | NA | non-coding | downstream | 133778 | 7791970 ~ 7796624 (-) |
| G45870 | NA | non-coding | downstream | 169229 | 7755114 ~ 7761173 (-) |
| G45970 | NA | non-coding | upstream | 108986 | 8039680 ~ 8039949 (-) |
| G45985 | NA | non-coding | upstream | 148774 | 8079468 ~ 8079696 (-) |
| G45986 | NA | non-coding | upstream | 149324 | 8080018 ~ 8080256 (-) |
| G46018 | NA | non-coding | upstream | 267538 | 8198232 ~ 8276329 (-) |
| G46106 | NA | non-coding | upstream | 478268 | 8408962 ~ 8835381 (-) |
| CI01000006_07500281_07507754 | NA | other | downstream | 419446 | 7500246 ~ 7507976 (-) |
| CI01000006_06974359_06976736 | NA | other | downstream | 953530 | 6973224 ~ 6976872 (-) |
| CI01000006_04560607_04560993 | NA | other | downstream | 3368334 | 4559509 ~ 4562068 (-) |
| G43549 | NA | other | downstream | 3574974 | 4352510 ~ 4355428 (-) |
| G43102 | NA | other | downstream | 4996418 | 2908451 ~ 2933984 (-) |
| CI01000006_10453630_10483241 | NA | other | upstream | 2552162 | 10453613 ~ 10484006 (-) |
| G47658 | NA | other | upstream | 3100217 | 11030911 ~ 11033127 (-) |
| CI01000006_11651067_11653761 | SMD3, SNRPD3, SNRPD3L, MGC52856 | other | upstream | 3719669 | 11650363 ~ 11654424 (-) |
| CI01000006_12348300_12348961 | GLRX | other | upstream | 4403715 | 12347180 ~ 12349383 (-) |
| CI01000006_12569291_12581457 | CELL, CEL.2, CEL.1 | other | upstream | 4420065 | 12569205 ~ 12582487 (-) |
