G45316


Basic Information

Item Value
gene id G45316
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 8004311 ~ 8005552 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU51511
TCATCCACTAAATGGTACGTGCCGGAACCAATTAACACCTGTCTGATAACAACATCCACACCAAGCTTAGCAGCAAGTCCCAGTTTGTCCAGCCACATAAAACCAGCTACAAATGTGTCTGATAGACCAATGGCGCCTCCACCATATGCCGAGCTCGTCTCTCCCAGCCAAACCTTCTTTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51511 True 183 lncRNA 0.49 2 8004311 8005552

Neighbor

gene id symbol gene type direction distance location
CI01000006_07939608_07940846 RXFP3 coding upstream 62896 7939318 ~ 7941415 (+)
CI01000006_07757777_07795187 NNT.L, NNT coding upstream 209053 7757526 ~ 7795258 (+)
CI01000006_07699736_07726659 MFHAS1 coding upstream 277314 7699736 ~ 7726997 (+)
CI01000006_07694812_07698078 ERI1 coding upstream 305877 7694812 ~ 7698434 (+)
CI01000006_07692311_07693192 PPP1R3B coding upstream 310194 7692240 ~ 7694117 (+)
CI01000006_08025159_08032131 NA coding downstream 19607 8025159 ~ 8032623 (+)
CI01000006_08108713_08122179 NA coding downstream 103011 8108563 ~ 8122364 (+)
CI01000006_08184916_08188512 NEFMA coding downstream 179247 8184799 ~ 8189299 (+)
CI01000006_08198328_08199463 NA coding downstream 192645 8197881 ~ 8200145 (+)
CI01000006_08222787_08225568 MED15 coding downstream 217235 8222787 ~ 8225568 (+)
G45325 NA non-coding upstream 10094 7993852 ~ 7994217 (+)
G45322 NA non-coding upstream 11446 7992633 ~ 7992865 (+)
G45308 NA non-coding upstream 32506 7971032 ~ 7971805 (+)
G45303 NA non-coding upstream 49062 7955046 ~ 7955249 (+)
G45297 NA non-coding upstream 57336 7946257 ~ 7946975 (+)
G45313 NA non-coding downstream 2170 8007722 ~ 8008279 (+)
G45346 NA non-coding downstream 63480 8069032 ~ 8069244 (+)
G45381 NA non-coding downstream 127655 8133207 ~ 8146080 (+)
G45356 NA non-coding downstream 149244 8154796 ~ 8157535 (+)
G45391 NA non-coding downstream 153084 8158636 ~ 8158893 (+)
G45265 NA other upstream 83956 7883867 ~ 7920355 (+)
G45178 NA other upstream 320640 7607604 ~ 7683671 (+)
G44872 NA other upstream 616427 7356352 ~ 7387884 (+)
CI01000006_07167131_07168925 NA other upstream 833777 7166778 ~ 7168925 (+)
CI01000006_06122278_06122736 NA other upstream 1875636 6122035 ~ 6122751 (+)
G45336 NA other downstream 13790 8019342 ~ 8021951 (+)
G45355 NA other downstream 204003 8209555 ~ 8212388 (+)
G45416 NA other downstream 813262 8818814 ~ 8834697 (+)
G46652 NA other downstream 2151027 10156579 ~ 10159251 (+)

Expression


Co-expression Network