G40756


Basic Information

Item Value
gene id G40756
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 6533365 ~ 6533674 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU54910
GATTCTCGGaccgcggatgagccacgggagtcacagagcgtggcgtcccatccgctggcttcacggagcgcggcgtctcggccgcgggattctcggagcgcggcgtctcggccgcgggattctcggagcgcggatgagccacgggagtcacagagcgtggcgtcccatccgctggcttcacggagcgcggcatCTCGGCCGCGAAAGTCACCGAGCGCGGGTAGAGTACagcccctgggggaaacggcaatggagtacgggctggtgcggggtagagctcctcctcctcctcggagCTACTGGGCGCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54910 True 310 TUCP 0.69 1 6533365 6533674

Neighbor

gene id symbol gene type direction distance location
lims1 lims1,LOC107687747,LOC107715819,LOC107572539,LOC108439929,LOC107551808 coding upstream 697278 5814514 ~ 5836087 (+)
adamts17 adamts17 coding upstream 754091 5762651 ~ 5779274 (+)
cers3 cers3 coding upstream 783000 5722876 ~ 5750365 (+)
lins1 NA coding upstream 815430 5709700 ~ 5717935 (+)
chsy1 chsy1,LOC107662251,LOC107742304,LOC107755644 coding upstream 1109052 5328228 ~ 5424313 (+)
pcdh17 pcdh17,LOC107572292,LOC107687749,LOC107739552,LOC107718221 coding downstream 344098 6877772 ~ 7013787 (+)
xxylt1 xxylt1 coding downstream 1568601 8102275 ~ 8162958 (+)
lsg1 lsg1,LOC107715771,LOC107736209 coding downstream 1828163 8361837 ~ 8377825 (+)
tmem44 NA coding downstream 1848582 8382256 ~ 8400857 (+)
atp13a3 atp13a3,LOC106613657 coding downstream 1925841 8459515 ~ 8498939 (+)
G40749 NA non-coding upstream 24055 6509072 ~ 6509310 (+)
G40742 NA non-coding upstream 68994 6464134 ~ 6464371 (+)
G40709 NA non-coding upstream 335129 6197959 ~ 6198236 (+)
G40697 NA non-coding upstream 404159 6094309 ~ 6129206 (+)
G40695 NA non-coding upstream 441083 6091871 ~ 6092282 (+)
G40759 NA non-coding downstream 7032 6540706 ~ 6540955 (+)
G40763 NA non-coding downstream 82292 6615966 ~ 6616168 (+)
G40780 NA non-coding downstream 355156 6888830 ~ 6889299 (+)
G40783 NA non-coding downstream 418112 6951786 ~ 6953565 (+)
G40784 NA non-coding downstream 420476 6954150 ~ 6999091 (+)
snrpa1 snrpa1,LOC107742305,LOC107691971 other upstream 1221021 5305687 ~ 5312344 (+)
LOC103046723 LOC108439632 other upstream 2017754 4504397 ~ 4515611 (+)
G40318 NA other upstream 2397780 4134510 ~ 4135585 (+)
LOC103044341 nlgn1,LOC107564928 other upstream 2676891 3837507 ~ 3856474 (+)
tlnrd1 mesdc1,LOC107591291,LOC107691577,LOC107709503,LOC107553753,LOC107662264 other upstream 2850181 3661675 ~ 3683184 (+)
LOC107197696 NA other downstream 1292849 7826523 ~ 7826914 (+)
LOC103028988 tdo2b,tdo2,LOC108428450,LOC107551803,LOC107718213,LOC107685956,LOC107715811 other downstream 1978430 8512104 ~ 8524313 (+)
LOC103027717 LOC108428455 other downstream 2184886 8718560 ~ 8762792 (+)
LOC103022991 NA other downstream 2388254 8921928 ~ 8935486 (+)
LOC103037553 LOC107753862,LOC107597184 other downstream 3462035 9995709 ~ 10022964 (+)

Expression


Co-expression Network