G45346


Basic Information

Item Value
gene id G45346
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 8069032 ~ 8069244 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU51547
TTAAGGTTGAACCACTGTACTCACATGAACTGTTTTAAATATGTCTTTAGTACCTTTCTGGGCATCTGAAAGTGTAAATTAACTTGCTGTCAATGGAGGCCTCACTGAGCCATCGGATTTTATCAAAAATATCTTAATTTGTGTTCCGAAGATGAACGAAAGTCTTACAGATGTGGAACGACATGATGGCAAGTAATTAATGACAGAAATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51547 True 213 lncRNA 0.39 1 8069032 8069244

Neighbor

gene id symbol gene type direction distance location
CI01000006_08025159_08032131 NA coding upstream 36409 8025159 ~ 8032623 (+)
CI01000006_07939608_07940846 RXFP3 coding upstream 127617 7939318 ~ 7941415 (+)
CI01000006_07757777_07795187 NNT.L, NNT coding upstream 273774 7757526 ~ 7795258 (+)
CI01000006_07699736_07726659 MFHAS1 coding upstream 342035 7699736 ~ 7726997 (+)
CI01000006_07694812_07698078 ERI1 coding upstream 370598 7694812 ~ 7698434 (+)
CI01000006_08108713_08122179 NA coding downstream 39319 8108563 ~ 8122364 (+)
CI01000006_08184916_08188512 NEFMA coding downstream 115555 8184799 ~ 8189299 (+)
CI01000006_08198328_08199463 NA coding downstream 128953 8197881 ~ 8200145 (+)
CI01000006_08222787_08225568 MED15 coding downstream 153543 8222787 ~ 8225568 (+)
CI01000006_08305571_08341681 NA coding downstream 236327 8305571 ~ 8341681 (+)
G45313 NA non-coding upstream 60753 8007722 ~ 8008279 (+)
G45316 NA non-coding upstream 63480 8004311 ~ 8005552 (+)
G45325 NA non-coding upstream 74815 7993852 ~ 7994217 (+)
G45322 NA non-coding upstream 76167 7992633 ~ 7992865 (+)
G45308 NA non-coding upstream 97227 7971032 ~ 7971805 (+)
G45381 NA non-coding downstream 63963 8133207 ~ 8146080 (+)
G45356 NA non-coding downstream 85552 8154796 ~ 8157535 (+)
G45391 NA non-coding downstream 89392 8158636 ~ 8158893 (+)
G45392 NA non-coding downstream 90001 8159245 ~ 8159467 (+)
G45359 NA non-coding downstream 165494 8234738 ~ 8238406 (+)
G45336 NA other upstream 47081 8019342 ~ 8021951 (+)
G45265 NA other upstream 148677 7883867 ~ 7920355 (+)
G45178 NA other upstream 385361 7607604 ~ 7683671 (+)
G44872 NA other upstream 681148 7356352 ~ 7387884 (+)
CI01000006_07167131_07168925 NA other upstream 898498 7166778 ~ 7168925 (+)
G45355 NA other downstream 140311 8209555 ~ 8212388 (+)
G45416 NA other downstream 749570 8818814 ~ 8834697 (+)
G46652 NA other downstream 2087335 10156579 ~ 10159251 (+)
G47145 NA other downstream 2416114 10485358 ~ 10511806 (+)

Expression


Co-expression Network