G45391


Basic Information

Item Value
gene id G45391
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 8158636 ~ 8158893 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU51600
AATAATGTTTACCCCTCTTTCACCGCTAGAGGTCAGCAGAGGACAAAATTACGAATGGTAAAAAAAACACTCCTGGGCCGGTTCTGACGATTTGTGCTAACAGCTAACAGTTTGTTTTGGGTTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTCAGTCAGAAGATTCCAGTATCCTATTTCGTGCGGTACAAAAAAAGCTGTCAGATGTAGAAGGACAGCGTGAAATGTGTTGGTAGCACAGGAAATAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51600 True 258 lncRNA 0.40 1 8158636 8158893

Neighbor

gene id symbol gene type direction distance location
CI01000006_08108713_08122179 NA coding upstream 36272 8108563 ~ 8122364 (+)
CI01000006_08025159_08032131 NA coding upstream 126013 8025159 ~ 8032623 (+)
CI01000006_07939608_07940846 RXFP3 coding upstream 217221 7939318 ~ 7941415 (+)
CI01000006_07757777_07795187 NNT.L, NNT coding upstream 363378 7757526 ~ 7795258 (+)
CI01000006_07699736_07726659 MFHAS1 coding upstream 431639 7699736 ~ 7726997 (+)
CI01000006_08184916_08188512 NEFMA coding downstream 25906 8184799 ~ 8189299 (+)
CI01000006_08198328_08199463 NA coding downstream 39304 8197881 ~ 8200145 (+)
CI01000006_08222787_08225568 MED15 coding downstream 63894 8222787 ~ 8225568 (+)
CI01000006_08305571_08341681 NA coding downstream 146678 8305571 ~ 8341681 (+)
CI01000006_08366730_08400944 NA coding downstream 207197 8366090 ~ 8402325 (+)
G45356 NA non-coding upstream 1101 8154796 ~ 8157535 (+)
G45381 NA non-coding upstream 12556 8133207 ~ 8146080 (+)
G45346 NA non-coding upstream 89392 8069032 ~ 8069244 (+)
G45313 NA non-coding upstream 150357 8007722 ~ 8008279 (+)
G45316 NA non-coding upstream 153084 8004311 ~ 8005552 (+)
G45392 NA non-coding downstream 352 8159245 ~ 8159467 (+)
G45359 NA non-coding downstream 75845 8234738 ~ 8238406 (+)
G45438 NA non-coding downstream 173686 8332579 ~ 8333478 (+)
G45528 NA non-coding downstream 413801 8572694 ~ 8574744 (+)
G45543 NA non-coding downstream 524088 8682981 ~ 8739598 (+)
G45336 NA other upstream 136685 8019342 ~ 8021951 (+)
G45265 NA other upstream 238281 7883867 ~ 7920355 (+)
G45178 NA other upstream 474965 7607604 ~ 7683671 (+)
G44872 NA other upstream 770752 7356352 ~ 7387884 (+)
CI01000006_07167131_07168925 NA other upstream 988102 7166778 ~ 7168925 (+)
G45355 NA other downstream 50662 8209555 ~ 8212388 (+)
G45416 NA other downstream 659921 8818814 ~ 8834697 (+)
G46652 NA other downstream 1997686 10156579 ~ 10159251 (+)
G47145 NA other downstream 2326465 10485358 ~ 10511806 (+)

Expression


Co-expression Network