G42068


Basic Information

Item Value
gene id G42068
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 12632816 ~ 12633429 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU56588
tcgaatttttgttttctgtgaagagtgttcactgtgcagtataaagtcagggttgagtagaatttctaagttgtaaaatcaatcatgggtaagcagcgcaacctctcaaccggaatagtggctcaaattcaagcccttcgccaacaaggcttgacccaaactaaaattgctgagcagctcggcatcagccagtcttccgtctgcaaagctctcaagaaaaactgcagcaagcgcaccaactgttccggcatccgaaaaacttctgctcgcgacaacaagcagctgagaaagatcgcagtcagcaaccggttcaagtccacttccgagctcaccgacttgtggaacaagcagaccggcgctgacgtctccagatcaaccacttaccgtcgtctgcgcgaactcggcttcaaatctcgcgttccagcagtaaaaccgatgctgaacaagaaacaaatggagaaacggctgaagtgggccaaagaacacggcgagtggactgctgaagactggcagaaagtggtcttcagtgacgaatcacgcttctgcatctccttcggtgaccaaggtcctcgtgtctggcgtcgtggtggcgaaacctacaaccacgagtgcgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56588 True 614 TUCP 0.51 1 12632816 12633429

Neighbor

gene id symbol gene type direction distance location
hnrnpm hnrnpm,hnrpm coding upstream 202970 12420587 ~ 12429846 (+)
march2 march2,LOC106613717,LOC107592682,LOC107655247 coding upstream 213173 12407546 ~ 12419643 (+)
LOC103047600 rab11b,LOC108429533,LOC107599444,LOC107655249,LOC107592688,LOC108280567 coding upstream 227668 12398273 ~ 12405148 (+)
LOC103021640 pip5k1c,LOC108429534 coding upstream 244387 12341614 ~ 12388429 (+)
LOC103046074 hmha1b,LOC108429536,LOC108271042,LOC107655244,LOC107669820 coding upstream 309744 12287917 ~ 12323072 (+)
LOC103025446 nphs2 coding downstream 16322 12649751 ~ 12657114 (+)
nfia nfia,LOC107592693,LOC107599440 coding downstream 226705 12860134 ~ 13094617 (+)
patj patj,LOC107715056,LOC108245549 coding downstream 528633 13162062 ~ 13365321 (+)
stx6 stx6,LOC107731540,LOC107669815,LOC107715114,LOC107653648 coding downstream 820189 13453618 ~ 13465045 (+)
LOC103033790 LOC103033790,LOC108429474 coding downstream 919483 13552912 ~ 13559630 (+)
G41975 NA non-coding upstream 176021 12454495 ~ 12456795 (+)
LOC107197698 NA non-coding upstream 195477 12432027 ~ 12437339 (+)
G41961 NA non-coding upstream 304578 12327895 ~ 12328238 (+)
G41954 NA non-coding upstream 346836 12285553 ~ 12285980 (+)
G41906 NA non-coding upstream 511386 12118432 ~ 12121430 (+)
G42070 NA non-coding downstream 1033 12634462 ~ 12634735 (+)
G42091 NA non-coding downstream 54096 12687525 ~ 12692753 (+)
G42103 atpaf1 non-coding downstream 108712 12742141 ~ 12744624 (+)
G42154 NA non-coding downstream 215134 12848563 ~ 12859161 (+)
G42178 NA non-coding downstream 506360 13139789 ~ 13140167 (+)
LOC103047294 gpx4,gpx4a,LOC108429535 other upstream 291903 12334344 ~ 12340913 (+)
tmem221 tmem221 other upstream 874108 11753887 ~ 11758708 (+)
tmem161a tmem161a,LOC107728546,LOC107687722,LOC107554814,LOC107599454,LOC107719614 other upstream 923133 11669447 ~ 11709683 (+)
G41828 LOC108429549,LOC108271147 other upstream 1052487 11571226 ~ 11580329 (+)
LOC103037553 LOC107753862,LOC107597184 other upstream 2609852 9995709 ~ 10022964 (+)
G42096 LOC108429524,LOC108271269,LOC103369106,LOC106613566,LOC106574586 other downstream 72130 12705559 ~ 12715028 (+)
G42208 ier5 other downstream 815163 13448592 ~ 13450477 (+)
LOC103032215 NA other downstream 875591 13509020 ~ 13522257 (+)
LOC103034435 NA other downstream 983654 13617083 ~ 13622042 (+)
LOC103037142 LOC108429501 other downstream 1177404 13810833 ~ 13857361 (+)

Expression


Co-expression Network