Gene
RNA
| Item | Value |
|---|---|
| gene id | G45543 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 8682981 ~ 8739598 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU51796 | True | 3778 | lncRNA | 0.43 | 2 | 8682981 | 8739598 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_08673737_08674685 | NA | coding | upstream | 7867 | 8673580 ~ 8675114 (+) |
| CI01000006_08528828_08531392 | NA | coding | upstream | 151524 | 8528828 ~ 8531457 (+) |
| CI01000006_08366730_08400944 | NA | coding | upstream | 280656 | 8366090 ~ 8402325 (+) |
| CI01000006_08305571_08341681 | NA | coding | upstream | 341300 | 8305571 ~ 8341681 (+) |
| CI01000006_08222787_08225568 | MED15 | coding | upstream | 457413 | 8222787 ~ 8225568 (+) |
| CI01000006_08757702_08765273 | WDR5, WDR5B, WDR5.L, BRAFLDRAFT_281422 | coding | downstream | 17821 | 8757419 ~ 8766062 (+) |
| CI01000006_08847431_08853895 | NA | coding | downstream | 106662 | 8846260 ~ 8853921 (+) |
| CI01000006_09004949_09014310 | GSNA, GSN | coding | downstream | 265076 | 9004674 ~ 9014589 (+) |
| CI01000006_09066050_09070383 | BARH1, BARHL1B, BARHL1 | coding | downstream | 326364 | 9065962 ~ 9070581 (+) |
| CI01000006_09098943_09103197 | NA | coding | downstream | 359084 | 9098682 ~ 9104172 (+) |
| G45528 | NA | non-coding | upstream | 108237 | 8572694 ~ 8574744 (+) |
| G45438 | NA | non-coding | upstream | 349503 | 8332579 ~ 8333478 (+) |
| G45359 | NA | non-coding | upstream | 444575 | 8234738 ~ 8238406 (+) |
| G45392 | NA | non-coding | upstream | 523514 | 8159245 ~ 8159467 (+) |
| G45391 | NA | non-coding | upstream | 524088 | 8158636 ~ 8158893 (+) |
| G45413 | NA | non-coding | downstream | 10313 | 8749911 ~ 8750496 (+) |
| G45734 | NA | non-coding | downstream | 184232 | 8923830 ~ 8924046 (+) |
| G45748 | NA | non-coding | downstream | 215701 | 8955299 ~ 8955505 (+) |
| G45765 | NA | non-coding | downstream | 257484 | 8997082 ~ 8997321 (+) |
| G45769 | NA | non-coding | downstream | 290762 | 9030360 ~ 9037570 (+) |
| G45355 | NA | other | upstream | 470593 | 8209555 ~ 8212388 (+) |
| CI01000006_08198328_08199463 | NA | other | upstream | 482836 | 8197881 ~ 8200145 (+) |
| G45336 | NA | other | upstream | 661030 | 8019342 ~ 8021951 (+) |
| G45265 | NA | other | upstream | 762626 | 7883867 ~ 7920355 (+) |
| G45178 | NA | other | upstream | 999310 | 7607604 ~ 7683671 (+) |
| G45416 | NA | other | downstream | 79216 | 8818814 ~ 8834697 (+) |
| G46652 | NA | other | downstream | 1416981 | 10156579 ~ 10159251 (+) |
| G47145 | NA | other | downstream | 1745760 | 10485358 ~ 10511806 (+) |
| G47159 | NA | other | downstream | 2676631 | 11416229 ~ 11521703 (+) |
| G47318 | NA | other | downstream | 2884669 | 11624267 ~ 11638252 (+) |
