Gene
RNA
| Item | Value |
|---|---|
| gene id | G42469 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 14160405 ~ 14160711 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| description |
|---|
| PREDICTED: cyclin-dependent kinase 15 |
| id | name | namespace |
|---|---|---|
| GO:0038032 | termination of G protein-coupled receptor signaling pathway | biological_process |
| GO:0045744 | negative regulation of G protein-coupled receptor signaling pathway | biological_process |
| GO:0023021 | termination of signal transduction | biological_process |
| GO:0008277 | regulation of G protein-coupled receptor signaling pathway | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU57189 | True | 307 | lncRNA | 0.46 | 1 | 14160405 | 14160711 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zbtb37 | zbtb37,LOC107592717,LOC107669813,LOC107715094,LOC107588062,LOC107757485 | coding | upstream | 161980 | 13989840 ~ 13998425 (+) |
| s1pr1 | s1pr1,LOC107715096,LOC107592715,LOC107669844 | coding | upstream | 175924 | 13981191 ~ 13984481 (+) |
| slc30a7 | slc30a7,LOC107588064 | coding | upstream | 269273 | 13861717 ~ 13891132 (+) |
| gpr88 | gpr88 | coding | upstream | 355299 | 13801468 ~ 13805106 (+) |
| cdc14a | cdc14a | coding | upstream | 366686 | 13710046 ~ 13793719 (+) |
| mrpl54 | mrpl54,LOC102788358 | coding | downstream | 146012 | 14306723 ~ 14309631 (+) |
| LOC103040508 | LOC108414270 | coding | downstream | 151787 | 14312498 ~ 14333039 (+) |
| LOC103042131 | LOC108424984 | coding | downstream | 173384 | 14334095 ~ 14345180 (+) |
| LOC103041829 | NA | coding | downstream | 198498 | 14359209 ~ 14412035 (+) |
| bsg | NA | coding | downstream | 301939 | 14462650 ~ 14480454 (+) |
| G42446 | NA | non-coding | upstream | 14048 | 14086909 ~ 14146357 (+) |
| G42442 | NA | non-coding | upstream | 87069 | 14056598 ~ 14073336 (+) |
| G42386 | NA | non-coding | upstream | 135009 | 14021643 ~ 14025396 (+) |
| G42389 | NA | non-coding | upstream | 157708 | 13998920 ~ 14002697 (+) |
| G42220 | LOC108429511,LOC100711005,LOC101481666,LOC102215641,LOC107731533,LOC103137085,LOC107715111 | non-coding | upstream | 624379 | 13530352 ~ 13536026 (+) |
| G42496 | fam32a,LOC107757479 | non-coding | downstream | 142707 | 14303418 ~ 14306941 (+) |
| G42527 | NA | non-coding | downstream | 216767 | 14377478 ~ 14378030 (+) |
| G42521 | NA | non-coding | downstream | 251578 | 14412289 ~ 14413746 (+) |
| LOC111192557 | NA | non-coding | downstream | 377610 | 14538321 ~ 14560369 (+) |
| G42564 | NA | non-coding | downstream | 467146 | 14627857 ~ 14669283 (+) |
| eps15l1 | eps15l1 | other | upstream | 25859 | 14070423 ~ 14134546 (+) |
| LOC103037142 | LOC108429501 | other | upstream | 303044 | 13810833 ~ 13857361 (+) |
| LOC103034435 | NA | other | upstream | 538363 | 13617083 ~ 13622042 (+) |
| LOC103032215 | NA | other | upstream | 638148 | 13509020 ~ 13522257 (+) |
| G42208 | ier5 | other | upstream | 709928 | 13448592 ~ 13450477 (+) |
| G42605 | NA | other | downstream | 734351 | 14895062 ~ 14899248 (+) |
| LOC103036127 | cunh19orf24 | other | downstream | 1817775 | 15978486 ~ 15984632 (+) |
| LOC103040819 | reep6,LOC107698004,LOC107745351,LOC107658751 | other | downstream | 2280220 | 16440931 ~ 16446287 (+) |
| LOC103044285 | NA | other | downstream | 2655890 | 16816601 ~ 16819251 (+) |
| LOC111192574 | NA | other | downstream | 2787669 | 16948380 ~ 16950360 (+) |
