Item | Value |
---|---|
gene id | G42600 |
gene name | NA |
gene type | non-coding |
species | mexican tetra (Astyanax mexicanus) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_035901.1 |
NCBI id | CM008304.1 |
chromosome length | 40584741 |
location | 14879019 ~ 14881077 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU57381 | True | 2033 | lncRNA | 0.34 | 2 | 14879019 | 14881077 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC103045821 | plak,LOC108438667,LOC108270763,LOC107562072,LOC107680531,LOC107753847 | coding | upstream | 10280 | 14834224 ~ 14868739 (+) |
LOC103026778 | NA | coding | upstream | 153062 | 14711374 ~ 14725957 (+) |
LOC103026177 | fgf22,LOC106613753,LOC106584266 | coding | upstream | 218994 | 14622178 ~ 14660025 (+) |
LOC103044493 | hcn2,LOC108429559,LOC107569045,LOC107569931,LOC107719599,LOC107655221 | coding | upstream | 344849 | 14483941 ~ 14534170 (+) |
bsg | NA | coding | upstream | 398565 | 14462650 ~ 14480454 (+) |
LOC103022023 | NA | coding | downstream | 91184 | 14972261 ~ 14994616 (+) |
LOC103023991 | rbbp7,rbb4l,LOC103023991,LOC108438657,LOC105893332 | coding | downstream | 164197 | 15045274 ~ 15051775 (+) |
rtel1 | rtel1,LOC107579445 | coding | downstream | 181550 | 15062627 ~ 15089931 (+) |
zgpat | zgpat | coding | downstream | 210294 | 15091371 ~ 15097213 (+) |
ptgfr | ptgfr | coding | downstream | 249900 | 15130977 ~ 15136409 (+) |
G42599 | cdc6,LOC107753851,LOC107718871,LOC102777898 | non-coding | upstream | 1659 | 14870356 ~ 14877360 (+) |
G42590 | NA | non-coding | upstream | 110305 | 14765706 ~ 14768714 (+) |
G42579 | NA | non-coding | upstream | 129836 | 14741274 ~ 14749183 (+) |
G42583 | NA | non-coding | upstream | 145734 | 14728460 ~ 14733285 (+) |
G42571 | LOC103031381 | non-coding | upstream | 190266 | 14685299 ~ 14688753 (+) |
G42604 | NA | non-coding | downstream | 9864 | 14890941 ~ 14903934 (+) |
G42626 | NA | non-coding | downstream | 85073 | 14966150 ~ 14966870 (+) |
G42632 | NA | non-coding | downstream | 119358 | 15000435 ~ 15002096 (+) |
G42633 | NA | non-coding | downstream | 129403 | 15010480 ~ 15010974 (+) |
G42636 | npepps,LOC107098842,LOC102793525 | non-coding | downstream | 133866 | 15014943 ~ 15019535 (+) |
eps15l1 | eps15l1 | other | upstream | 744473 | 14070423 ~ 14134546 (+) |
LOC103037142 | LOC108429501 | other | upstream | 1021658 | 13810833 ~ 13857361 (+) |
LOC103034435 | NA | other | upstream | 1256977 | 13617083 ~ 13622042 (+) |
LOC103032215 | NA | other | upstream | 1356762 | 13509020 ~ 13522257 (+) |
G42208 | ier5 | other | upstream | 1428542 | 13448592 ~ 13450477 (+) |
G42605 | NA | other | downstream | 13985 | 14895062 ~ 14899248 (+) |
LOC103036127 | cunh19orf24 | other | downstream | 1097409 | 15978486 ~ 15984632 (+) |
LOC103040819 | reep6,LOC107698004,LOC107745351,LOC107658751 | other | downstream | 1559854 | 16440931 ~ 16446287 (+) |
LOC103044285 | NA | other | downstream | 1935524 | 16816601 ~ 16819251 (+) |
LOC111192574 | NA | other | downstream | 2067303 | 16948380 ~ 16950360 (+) |