G42605


Basic Information

Item Value
gene id G42605
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 14895062 ~ 14899248 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU57395
GCATTGGGACCATTGATGTCAATGTCGGGAGAACCAATGTCTGCATTCAATTTGGGTGATGACAAATTAAAATCTGGCCCATCCCAGTCTCCTTTAACATCCATGTCTGGTCCTTTAAGTTTTTGGAATGCTAATTTTAGGGGCTTTCAAGGTGGGCATTTTGAGTTTGCCTGATGGACCATCAATATCAATGTCAGGAGAATTTAAGTCAAGCCCTGGTGCATTGACTTCTCCTTTTATTTTAGGAGCTGAGAGATCCATCTCAGGTGCCTTAACTTTAGGTCCTGAGAGTCCAAAATCAGGCATCTTAAACTTGGGTTTCTTCATTTTGCCTGATGGTAAGTTTATGTCTGGGACTGAGAAGTCTGTTTTGGGACCTTTTAAACTAGCATTGGGACCATTGATGTCAATGTCGGGAGAACCAATGTCTGCATTCAATTTGGGTGATGACAGATTCAAATCTGGCCCATCCCAGTCTCCTTTAACATCCATGTCTTGTCCTTTAAGTTTTGGAATGCTAATTTTAGGTGCTTTCAAGGTGGGCATTTTGAGTTTGCCTGATGGACCATCAATATCAATGTCAGGAGAATTCAGGTCGAGCTGTGGTGAATTAAATTCTCCTTTTATTTTAGGAGCTGAGAGATCCATCTCAGGTGCCTTAACTTTAGGTCCCGAGAGTCCAAAATCAGGCATCTTAAACTTGGGTTTCTTCATTTTGCCTGATGGTAAGTTAACATCTGGGACTGAGAAGTCTGTTTTGGGACCTTTTAAATTAGCATTGGGACCATTGATGTCAATGTCAGGTGTAGTAATTCCTGCATTCAGTTTGGGTGATGACAAATTAAAATCTGGCCCATCCCAGTCTCCTTTAACATCCATTTCCGGTCCTTTAAGTTTTGGAATGCTAATTTTAGGGGCTTTCAATGTGGGCATTTTGAGTTTGCCTGATGGTAAGTTCACGTTTGGGACTGAGAAGTCTGTTT

Function

GO:

id name namespace
GO:0008519 ammonium transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57395 True 983 TUCP 0.42 3 14895062 14899248

Neighbor

gene id symbol gene type direction distance location
LOC103045821 plak,LOC108438667,LOC108270763,LOC107562072,LOC107680531,LOC107753847 coding upstream 26323 14834224 ~ 14868739 (+)
LOC103026778 NA coding upstream 169105 14711374 ~ 14725957 (+)
LOC103026177 fgf22,LOC106613753,LOC106584266 coding upstream 235037 14622178 ~ 14660025 (+)
LOC103044493 hcn2,LOC108429559,LOC107569045,LOC107569931,LOC107719599,LOC107655221 coding upstream 360892 14483941 ~ 14534170 (+)
bsg NA coding upstream 414608 14462650 ~ 14480454 (+)
LOC103022023 NA coding downstream 73013 14972261 ~ 14994616 (+)
LOC103023991 rbbp7,rbb4l,LOC103023991,LOC108438657,LOC105893332 coding downstream 146026 15045274 ~ 15051775 (+)
rtel1 rtel1,LOC107579445 coding downstream 163379 15062627 ~ 15089931 (+)
zgpat zgpat coding downstream 192123 15091371 ~ 15097213 (+)
ptgfr ptgfr coding downstream 231729 15130977 ~ 15136409 (+)
G42600 NA non-coding upstream 13985 14879019 ~ 14881077 (+)
G42599 cdc6,LOC107753851,LOC107718871,LOC102777898 non-coding upstream 17702 14870356 ~ 14877360 (+)
G42590 NA non-coding upstream 126348 14765706 ~ 14768714 (+)
G42579 NA non-coding upstream 145879 14741274 ~ 14749183 (+)
G42583 NA non-coding upstream 161777 14728460 ~ 14733285 (+)
G42626 NA non-coding downstream 66902 14966150 ~ 14966870 (+)
G42632 NA non-coding downstream 101187 15000435 ~ 15002096 (+)
G42633 NA non-coding downstream 111232 15010480 ~ 15010974 (+)
G42636 npepps,LOC107098842,LOC102793525 non-coding downstream 115695 15014943 ~ 15019535 (+)
G42637 txlng non-coding downstream 118552 15017800 ~ 15054880 (+)
eps15l1 eps15l1 other upstream 760516 14070423 ~ 14134546 (+)
LOC103037142 LOC108429501 other upstream 1037701 13810833 ~ 13857361 (+)
LOC103034435 NA other upstream 1273020 13617083 ~ 13622042 (+)
LOC103032215 NA other upstream 1372805 13509020 ~ 13522257 (+)
G42208 ier5 other upstream 1444585 13448592 ~ 13450477 (+)
LOC103036127 cunh19orf24 other downstream 1079238 15978486 ~ 15984632 (+)
LOC103040819 reep6,LOC107698004,LOC107745351,LOC107658751 other downstream 1541683 16440931 ~ 16446287 (+)
LOC103044285 NA other downstream 1917353 16816601 ~ 16819251 (+)
LOC111192574 NA other downstream 2049132 16948380 ~ 16950360 (+)
dda1 dda1,LOC105913185,LOC107685208,LOC105012003 other downstream 2113219 17012467 ~ 17017856 (+)

Expression


Co-expression Network