G46199


Basic Information

Item Value
gene id G46199
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 8976671 ~ 8976871 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU52547
ATTTTACCAGTGACAGGGTGTGAAATTGATCTGCTGCCTTTGACAAGTGATCAGCCACATTGTATGCTAGCCTTCAAATGTTTGGGATTGGAAAGATTAATGTTTTTGAAAGAAAGTCTCTTACGCTCACAAGGCTGCACTTAATTTCAGTAGCGATTACTCTAGATTACTCTTCAGTGTCCCATGATCCTTCAGAAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52547 True 201 lncRNA 0.42 1 8976671 8976871

Neighbor

gene id symbol gene type direction distance location
CI01000006_08866054_08871468 NA coding downstream 105203 8866019 ~ 8871468 (-)
CI01000006_08831292_08836066 NA coding downstream 140053 8830955 ~ 8836618 (-)
CI01000006_08797043_08827629 RXRA, RXRAA coding downstream 148985 8796836 ~ 8827686 (-)
CI01000006_08780644_08787820 NA coding downstream 188851 8780117 ~ 8787820 (-)
CI01000006_08749304_08751622 BRD3A coding downstream 222988 8748737 ~ 8753683 (-)
CI01000006_09019351_09023876 STOM coding upstream 42405 9019276 ~ 9023876 (-)
CI01000006_09161066_09181709 TSC1B, TSC1 coding upstream 184056 9160927 ~ 9181709 (-)
CI01000006_09197554_09198425 NA coding upstream 220404 9197275 ~ 9198425 (-)
CI01000006_09205576_09277358 BCR coding upstream 228705 9205576 ~ 9278154 (-)
CI01000006_09282220_09315540 ATP2A2.S, ATP2A2, ATP2A2A, ATP2A2B coding upstream 303984 9280855 ~ 9316496 (-)
G46106 NA non-coding downstream 141290 8408962 ~ 8835381 (-)
G46089 NA non-coding downstream 477869 8481249 ~ 8498802 (-)
G46018 NA non-coding downstream 700342 8198232 ~ 8276329 (-)
G45986 NA non-coding downstream 896415 8080018 ~ 8080256 (-)
G45985 NA non-coding downstream 896975 8079468 ~ 8079696 (-)
G46102 NA non-coding upstream 22222 8999093 ~ 9008209 (-)
G46076 NA non-coding upstream 37260 9014131 ~ 9016971 (-)
G46208 NA non-coding upstream 47268 9024139 ~ 9026251 (-)
G46257 NA non-coding upstream 119588 9096459 ~ 9096705 (-)
G46396 NA non-coding upstream 126679 9103550 ~ 9103860 (-)
CI01000006_07500281_07507754 NA other downstream 1465715 7500246 ~ 7507976 (-)
CI01000006_06974359_06976736 NA other downstream 1999799 6973224 ~ 6976872 (-)
CI01000006_04560607_04560993 NA other downstream 4414603 4559509 ~ 4562068 (-)
G43549 NA other downstream 4621243 4352510 ~ 4355428 (-)
G43102 NA other downstream 6042687 2908451 ~ 2933984 (-)
CI01000006_10453630_10483241 NA other upstream 1505985 10453613 ~ 10484006 (-)
G47658 NA other upstream 2054040 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 2673492 11650363 ~ 11654424 (-)
CI01000006_12348300_12348961 GLRX other upstream 3357538 12347180 ~ 12349383 (-)
CI01000006_12569291_12581457 CELL, CEL.2, CEL.1 other upstream 3373888 12569205 ~ 12582487 (-)

Expression


Co-expression Network