Gene
RNA
| Item | Value |
|---|---|
| gene id | adgrl2 |
| gene name | adgrl2 |
| gene type | misc |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 17633096 ~ 17768954 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| symbol | description |
|---|---|
| adgrl2 | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and brain development. Predicted to act upstream of or within positive regulation of synapse assembly and response to bacterium. Predicted to be located in axon and plasma membrane. Predicted to be integral component of postsynaptic membrane. Predicted to be active in glutamatergic synapse and neuron projection. Predicted to be integral component of plasma membrane. |
| id | description |
|---|---|
| K04593 | ADGRL2, LPHN2; adhesion G protein-coupled receptor L2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU58677 | False | 892 | lncRNA | 0.35 | 2 | 17736948 | 17768954 |
| TU58683 | False | 269 | lncRNA | 0.29 | 2 | 17691788 | 17768954 |
| XM_007233159.3 | False | 6934 | mRNA | 0.50 | 26 | 17641563 | 17768952 |
| XM_007233160.3 | False | 6212 | mRNA | 0.49 | 26 | 17666209 | 17768952 |
| XM_007233161.3 | False | 6918 | mRNA | 0.50 | 25 | 17641564 | 17768952 |
| XM_007233162.3 | False | 6916 | mRNA | 0.50 | 25 | 17641563 | 17768952 |
| XM_007233163.3 | False | 6895 | mRNA | 0.50 | 25 | 17641563 | 17768952 |
| XM_007233164.3 | False | 6889 | mRNA | 0.50 | 25 | 17641563 | 17768952 |
| XM_007233165.3 | False | 6861 | mRNA | 0.50 | 24 | 17641564 | 17768952 |
| XM_007233166.3 | False | 6843 | mRNA | 0.50 | 23 | 17641564 | 17768952 |
| XM_007233167.3 | False | 6827 | mRNA | 0.50 | 22 | 17641565 | 17768952 |
| XM_007233168.3 | False | 6804 | mRNA | 0.50 | 22 | 17641564 | 17768952 |
| XM_007233169.3 | False | 6787 | mRNA | 0.50 | 24 | 17641563 | 17768952 |
| XM_007233170.3 | False | 6742 | mRNA | 0.50 | 23 | 17641563 | 17768952 |
| XM_007233171.3 | False | 6714 | mRNA | 0.50 | 22 | 17641564 | 17768952 |
| XM_007233172.3 | False | 6675 | mRNA | 0.50 | 21 | 17641564 | 17768952 |
| XM_007233173.3 | False | 6659 | mRNA | 0.50 | 20 | 17641565 | 17768952 |
| XM_007233174.3 | False | 4844 | mRNA | 0.52 | 26 | 17641563 | 17766828 |
| XM_007233175.3 | False | 4800 | mRNA | 0.52 | 27 | 17641563 | 17766731 |
| XM_007233176.3 | False | 4809 | mRNA | 0.52 | 27 | 17641563 | 17766774 |
| XM_007233177.3 | False | 4795 | mRNA | 0.52 | 27 | 17641563 | 17766774 |
| XM_007233178.3 | False | 4791 | mRNA | 0.52 | 26 | 17641563 | 17766774 |
| XM_007233179.3 | False | 5044 | mRNA | 0.52 | 26 | 17641563 | 17767041 |
| XM_007233180.3 | False | 4639 | mRNA | 0.52 | 26 | 17641563 | 17766707 |
| XM_007233181.3 | False | 4666 | mRNA | 0.52 | 25 | 17641563 | 17766773 |
| XM_007233185.3 | False | 4662 | mRNA | 0.52 | 25 | 17641563 | 17766774 |
| XM_007233186.3 | False | 4648 | mRNA | 0.52 | 25 | 17641563 | 17766774 |
| XM_007233190.3 | False | 6845 | mRNA | 0.50 | 23 | 17641565 | 17768952 |
| XM_015601256.2 | False | 6806 | mRNA | 0.50 | 22 | 17641565 | 17768952 |
| XM_015601257.2 | False | 6805 | mRNA | 0.50 | 25 | 17641563 | 17768952 |
| XM_015601260.2 | False | 4680 | mRNA | 0.52 | 26 | 17641563 | 17766774 |
| XM_022669733.1 | True | 7095 | mRNA | 0.48 | 26 | 17643564 | 17768952 |
| XM_022669734.1 | False | 6127 | mRNA | 0.49 | 26 | 17633096 | 17768952 |
| XM_022669735.1 | False | 6698 | mRNA | 0.50 | 21 | 17641565 | 17768952 |
| XM_022669736.1 | False | 4800 | mRNA | 0.52 | 27 | 17641563 | 17766745 |
| XM_022669737.1 | False | 4715 | mRNA | 0.52 | 25 | 17641563 | 17766828 |
| XM_022669738.1 | False | 4670 | mRNA | 0.52 | 24 | 17641563 | 17766828 |
| XM_022669739.1 | False | 4671 | mRNA | 0.52 | 26 | 17641563 | 17766731 |
| XM_022669740.1 | False | 4666 | mRNA | 0.52 | 26 | 17641563 | 17766774 |
| XM_022669741.1 | False | 4630 | mRNA | 0.52 | 25 | 17641563 | 17766038 |
| XM_022669742.1 | False | 4595 | mRNA | 0.52 | 25 | 17641563 | 17764200 |
| XM_022669743.1 | False | 4702 | mRNA | 0.51 | 24 | 17641563 | 17763227 |
| XM_022669744.1 | False | 6877 | mRNA | 0.50 | 24 | 17641563 | 17768952 |
| XM_022669745.1 | False | 6748 | mRNA | 0.50 | 23 | 17641563 | 17768952 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lsm4 | lsm4,LOC107680485 | coding | upstream | 322839 | 17307608 ~ 17310257 (+) |
| ddx49 | ddx49,LOC107757937,LOC107747066 | coding | upstream | 326083 | 17302079 ~ 17307013 (+) |
| comp | comp,LOC107733073,LOC107665851,LOC107680551,LOC107747026 | coding | upstream | 363570 | 17259365 ~ 17269526 (+) |
| tmem38a | tmem38a,LOC107730482,LOC107658508,LOC107751025 | coding | upstream | 379309 | 17247081 ~ 17253787 (+) |
| gamt | gamt,LOC107747770,LOC107685360,LOC107757934,LOC107597217 | coding | upstream | 575989 | 17053411 ~ 17057107 (+) |
| dnase2b | NA | coding | downstream | 390603 | 18159557 ~ 18166817 (+) |
| rpf1 | rpf1 | coding | downstream | 400739 | 18169693 ~ 18175127 (+) |
| ctbs | ctbs | coding | downstream | 407993 | 18176947 ~ 18181454 (+) |
| LOC111192515 | NA | coding | downstream | 430385 | 18199339 ~ 18203357 (+) |
| LOC103045882 | NA | coding | downstream | 470300 | 18239254 ~ 18246244 (+) |
| G43414 | NA | non-coding | upstream | 146285 | 17483676 ~ 17486811 (+) |
| LOC111192514 | NA | non-coding | upstream | 155052 | 17451040 ~ 17478044 (+) |
| G43382 | NA | non-coding | upstream | 357731 | 17272299 ~ 17275365 (+) |
| G43363 | pex11g | non-coding | upstream | 430256 | 17200297 ~ 17202840 (+) |
| G43254 | NA | non-coding | upstream | 550088 | 17080351 ~ 17083008 (+) |
| G43561 | uric,LOC103030682,LOC108430123,LOC100136464,LOC105895190,LOC103392251,LOC102300275,LOC102208991 | non-coding | downstream | 383906 | 18152860 ~ 18157853 (+) |
| G43564 | NA | non-coding | downstream | 397929 | 18166883 ~ 18167890 (+) |
| G43567 | NA | non-coding | downstream | 414236 | 18183190 ~ 18183786 (+) |
| G43574 | ssx2ip | non-coding | downstream | 480500 | 18249454 ~ 18251731 (+) |
| G43638 | clcc1 | non-coding | downstream | 543819 | 18312773 ~ 18313342 (+) |
| G43360 | apba3,si:ch73-40i7.5,LOC108271288,LOC105910839,LOC107750992 | other | upstream | 436980 | 17193538 ~ 17196116 (+) |
| dda1 | dda1,LOC105913185,LOC107685208,LOC105012003 | other | upstream | 615240 | 17012467 ~ 17017856 (+) |
| LOC111192574 | NA | other | upstream | 682736 | 16948380 ~ 16950360 (+) |
| LOC103044285 | NA | other | upstream | 813845 | 16816601 ~ 16819251 (+) |
| LOC103040819 | reep6,LOC107698004,LOC107745351,LOC107658751 | other | upstream | 1186809 | 16440931 ~ 16446287 (+) |
| G43537 | NA | other | downstream | 243219 | 18012173 ~ 18014499 (+) |
| prkacb | prkacb,LOC108411205,LOC108267323,LOC103034112,LOC107745335,LOC107669012 | other | downstream | 354792 | 18123746 ~ 18143539 (+) |
| samd13 | samd13,LOC107592550 | other | downstream | 376245 | 18145199 ~ 18152349 (+) |
| G43568 | LOC108270632,LOC108261872 | other | downstream | 418085 | 18187039 ~ 18240232 (+) |
| p3h2 | p3h2,LOC107560692,LOC107564922,LOC107664742 | other | downstream | 1953648 | 19722602 ~ 19790148 (+) |
