G46256


Basic Information

Item Value
gene id G46256
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 9095203 ~ 9095595 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU52604
TTTACTCACCCTCAAGCCATCCTAGGTGTACAGGTGCTGGTCATATAATTAGAATATCATCAAAAAGTTGATTTATTTCACTAATTCCATTCAAAAAGTGAGACTTGTATATTATATTCATTCATTACACACAGACTGATATATTTCAAATGTTTATTTCTTTTAATTTTGATGATTATAACTGACAACTAAGGAAAATCCCAAATTCAGTATCTCAGAAAATTAGAATATTACTTAAGACCAATACAAAGAAAGGATTTTTAGAAATCTTGGCCAACTGAAAAGTATGAACATAAAAAGTATGAGCATGTACAGCACTCAATACTTAGTTGGGGCTCCTTTTGCCTGAATTACTGCAGCAATGCGGCGTGGCATGGAGTCGATCAGTCTNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52604 True 393 lncRNA 0.40 1 9095203 9095595

Neighbor

gene id symbol gene type direction distance location
CI01000006_09066050_09070383 BARH1, BARHL1B, BARHL1 coding upstream 24622 9065962 ~ 9070581 (+)
CI01000006_09004949_09014310 GSNA, GSN coding upstream 80614 9004674 ~ 9014589 (+)
CI01000006_08847431_08853895 NA coding upstream 241282 8846260 ~ 8853921 (+)
CI01000006_08757702_08765273 WDR5, WDR5B, WDR5.L, BRAFLDRAFT_281422 coding upstream 329141 8757419 ~ 8766062 (+)
CI01000006_08673737_08674685 NA coding upstream 420089 8673580 ~ 8675114 (+)
CI01000006_09098943_09103197 NA coding downstream 3087 9098682 ~ 9104172 (+)
CI01000006_09105004_09106470 NA coding downstream 8620 9104215 ~ 9106963 (+)
CI01000006_09107491_09114820 GTF3C4 coding downstream 11231 9106826 ~ 9115071 (+)
CI01000006_09192219_09195918 NA coding downstream 96302 9191897 ~ 9195984 (+)
CI01000006_09320331_09321778 UB2G1, UBE2G1A, UBE2G1, UBE2G1B coding downstream 224736 9320331 ~ 9321778 (+)
G46248 NA non-coding upstream 3744 9091251 ~ 9091459 (+)
G46246 NA non-coding upstream 4971 9090026 ~ 9090232 (+)
G45796 NA non-coding upstream 16541 9078441 ~ 9078662 (+)
G45787 NA non-coding upstream 40907 9053984 ~ 9054296 (+)
G45778 NA non-coding upstream 54035 9040967 ~ 9041168 (+)
G46267 NA non-coding downstream 6440 9102035 ~ 9102456 (+)
G46284 NA non-coding downstream 45835 9141430 ~ 9141660 (+)
G46288 NA non-coding downstream 52076 9147671 ~ 9147892 (+)
G46296 NA non-coding downstream 62982 9158577 ~ 9158906 (+)
G46316 NA non-coding downstream 94388 9189983 ~ 9197387 (+)
G45416 NA other upstream 260506 8818814 ~ 8834697 (+)
G45355 NA other upstream 882815 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 895058 8197881 ~ 8200145 (+)
G45336 NA other upstream 1073252 8019342 ~ 8021951 (+)
G45265 NA other upstream 1174848 7883867 ~ 7920355 (+)
G46652 NA other downstream 1060984 10156579 ~ 10159251 (+)
G47145 NA other downstream 1389763 10485358 ~ 10511806 (+)
G47159 NA other downstream 2320634 11416229 ~ 11521703 (+)
G47318 NA other downstream 2528672 11624267 ~ 11638252 (+)
G48094 NA other downstream 3182025 12277620 ~ 12279541 (+)

Expression


Co-expression Network