G46288


Basic Information

Item Value
gene id G46288
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 9147671 ~ 9147892 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU52647
ATTTTTACAGTATGCATTTAAAGGCCAGCTCCCCATGAGCCATAACATCTAGCCAAGGCCCAAACATGGCGTATTGATTTTTCTAATCTGTTTACTCCTCTCCTGCACTTTTGAGTAGGCTGCTGGAGAGCCTGGTTTGCCCTGGGGCGTTCAGTGGGGCCCAGCATGTTTCAGCTTTGATCATCGTTCAGCCAGCGGATTAACATATGCAGACTCTCTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52647 True 222 lncRNA 0.33 1 9147671 9147892

Neighbor

gene id symbol gene type direction distance location
CI01000006_09107491_09114820 GTF3C4 coding upstream 32600 9106826 ~ 9115071 (+)
CI01000006_09105004_09106470 NA coding upstream 40708 9104215 ~ 9106963 (+)
CI01000006_09098943_09103197 NA coding upstream 43499 9098682 ~ 9104172 (+)
CI01000006_09066050_09070383 BARH1, BARHL1B, BARHL1 coding upstream 77090 9065962 ~ 9070581 (+)
CI01000006_09004949_09014310 GSNA, GSN coding upstream 133082 9004674 ~ 9014589 (+)
CI01000006_09192219_09195918 NA coding downstream 44005 9191897 ~ 9195984 (+)
CI01000006_09320331_09321778 UB2G1, UBE2G1A, UBE2G1, UBE2G1B coding downstream 172439 9320331 ~ 9321778 (+)
CI01000006_09334843_09337295 FAM216A coding downstream 186909 9334801 ~ 9337403 (+)
CI01000006_09497508_09511925 NA coding downstream 348914 9496806 ~ 9512720 (+)
CI01000006_09569228_09574340 NA coding downstream 420388 9568280 ~ 9575061 (+)
G46284 NA non-coding upstream 6011 9141430 ~ 9141660 (+)
G46267 NA non-coding upstream 45215 9102035 ~ 9102456 (+)
G46256 NA non-coding upstream 52076 9095203 ~ 9095595 (+)
G46248 NA non-coding upstream 56212 9091251 ~ 9091459 (+)
G46246 NA non-coding upstream 57439 9090026 ~ 9090232 (+)
G46296 NA non-coding downstream 10685 9158577 ~ 9158906 (+)
G46316 NA non-coding downstream 42091 9189983 ~ 9197387 (+)
G46278 NA non-coding downstream 42470 9190362 ~ 9283895 (+)
G46325 NA non-coding downstream 70559 9218451 ~ 9225417 (+)
G46273 NA non-coding downstream 132433 9280325 ~ 9326518 (+)
G45416 NA other upstream 312974 8818814 ~ 8834697 (+)
G45355 NA other upstream 935283 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 947526 8197881 ~ 8200145 (+)
G45336 NA other upstream 1125720 8019342 ~ 8021951 (+)
G45265 NA other upstream 1227316 7883867 ~ 7920355 (+)
G46652 NA other downstream 1008687 10156579 ~ 10159251 (+)
G47145 NA other downstream 1337466 10485358 ~ 10511806 (+)
G47159 NA other downstream 2268337 11416229 ~ 11521703 (+)
G47318 NA other downstream 2476375 11624267 ~ 11638252 (+)
G48094 NA other downstream 3129728 12277620 ~ 12279541 (+)

Expression


Co-expression Network