G46565


Basic Information

Item Value
gene id G46565
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 9851135 ~ 9851458 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU52942
CGTTCTCGTGACCTTGCGCAACGTTCCCTAAAAGTTCTCTAAAGGTGACGAAAATTCAGAACCTTTACAGAACATTAGAGACGTTCCTAAAACGTCCTCTTTTGGTAATGAAAGTGCTGCAGTTTAAGGTTCCTTATATGACTTTAGGGGGATGTTCCATTTTGGTTATTTTATGGTCACATAAGAACGTTACAAAGAGGACATTTGGGACATTAACAGAATGTTCCCACACGGTTCTCTGTTGGTCATTTAATAACGTTCCCGATATGACATTAGGGGGACGTTCTATTTTGGTTATTTTATGGTCGACATTTGAGGAAGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52942 True 324 lncRNA 0.36 1 9851135 9851458

Neighbor

gene id symbol gene type direction distance location
CI01000006_09836923_09844045 NA coding upstream 6787 9836923 ~ 9846207 (+)
CI01000006_09712289_09783579 UNC5DA coding upstream 67556 9712289 ~ 9783579 (+)
CI01000006_09569228_09574340 NA coding upstream 276074 9568280 ~ 9575061 (+)
CI01000006_09497508_09511925 NA coding upstream 338415 9496806 ~ 9512720 (+)
CI01000006_09334843_09337295 FAM216A coding upstream 513732 9334801 ~ 9337403 (+)
CI01000006_09884959_09889794 NA coding downstream 32981 9884439 ~ 9890289 (+)
CI01000006_09891107_09897750 NA coding downstream 39649 9891107 ~ 9897763 (+)
CI01000006_09910027_09913958 NA coding downstream 57912 9909370 ~ 9914104 (+)
CI01000006_09918611_09921465 MZT2B coding downstream 67153 9918611 ~ 9921793 (+)
CI01000006_09998680_10008491 LHX5 coding downstream 147222 9998680 ~ 10009048 (+)
G46526 NA non-coding upstream 21561 9819361 ~ 9829574 (+)
G46541 NA non-coding upstream 195951 9654306 ~ 9655184 (+)
G46524 NA non-coding upstream 248615 9595654 ~ 9602520 (+)
G46525 NA non-coding upstream 263336 9575315 ~ 9587799 (+)
G46566 NA non-coding downstream 171 9851629 ~ 9851834 (+)
G46569 NA non-coding downstream 5289 9856747 ~ 9857095 (+)
G46662 NA non-coding downstream 135456 9986914 ~ 9987133 (+)
G46665 NA non-coding downstream 137523 9988981 ~ 9989253 (+)
G46671 NA non-coding downstream 142285 9993743 ~ 9994022 (+)
G45416 NA other upstream 1016438 8818814 ~ 8834697 (+)
G45355 NA other upstream 1638747 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 1650990 8197881 ~ 8200145 (+)
G45336 NA other upstream 1829184 8019342 ~ 8021951 (+)
G45265 NA other upstream 1930780 7883867 ~ 7920355 (+)
G46652 NA other downstream 305121 10156579 ~ 10159251 (+)
G47145 NA other downstream 633900 10485358 ~ 10511806 (+)
G47159 NA other downstream 1564771 11416229 ~ 11521703 (+)
G47318 NA other downstream 1772809 11624267 ~ 11638252 (+)
G48094 NA other downstream 2426162 12277620 ~ 12279541 (+)

Expression


Co-expression Network