immp1l (immp1l,LOC107594745)


Basic Information

Item Value
gene id immp1l
gene name immp1l,LOC107594745
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 671881 ~ 681622 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007239783.3
ACTGCCGCCCCGCCACTCAGAGCAGCGCGTGCAGGAGGCGAGGGGCAGAGAGCGGAAGTGGAGGAAAACATCAGAGAAGCTGTGAAGGGTGTGTGGTGCTGCTGTTGCGATGGTGTACAGGGTTTTGGGGAGAGCTCTAGGCTTTGTCGGCTTCACGGTTCAGTACGGCTGTATAGCACACTGTGCTTTCGAGTACATAGGAGAGTTTGTGGTGTGCTCTGGACCCTCAATGGAGCCCACTATCACTAACCACAATGTTGTTTTCTCTGAGCGCATCAGCAGACATCTGTACCGGATAGAAAAAGGGGATATCGTAATTGCTAAAAGTCCATTTAATCCGAGGATGAATGTCTGTAAAAGAGTGATCGGAATCGAGGGGGATAAAGTGTGTACCAGCGAGCCCTCAGACacctttaaaacacacacttttGTACCACGAGGTCACGTGTGGTTGGAGGGAGATAACCTCAGTAACTCCACTGATTCGCGGAGCTATGGGCCGGTTCCCTACGCTCTGATCAGAGGGCGAGTGTGTTTAAAGCTGTGGCCTCCTGATAGTTTCGGGGTTCTGCGCGAGAGTCCGAACAGCGGGAGAATCCAAACCAGCACTGacagaaactgattattttataataaattaatattaattaa
>XM_007239784.2
GCTCCAGCCCGCTGCCGCTCCGCTTCTCACCCAGCCTGCAGCACAGTCTATAGGCTGCACAGCAACACAGTCCGCGGGTCCCTATTCAGTTATAATAATTAATGCAGACTAGTTTACAGTATGAAGTGTGTAATATATAGTTTTCGCCCGTTCTTATTTTTTCGCCTGTTCCTGGGCTTCCGGTGTCCTATAAGGCCTTTTTTCTCAACAGTATTCTAATTCATTAGctggggcagtggtagtgtgtTGACTGCAAGCttgacgacacgggttcgattCCCGCGGTGTGTGGTGCTGCTGTTGCGATGGTGTACAGGGTTTTGGGGAGAGCTCTAGGCTTTGTCGGCTTCACGGTTCAGTACGGCTGTATAGCACACTGTGCTTTCGAGTACATAGGAGAGTTTGTGGTGTGCTCTGGACCCTCAATGGAGCCCACTATCACTAACCACAATGTTGTTTTCTCTGAGCGCATCAGCAGACATCTGTACCGGATAGAAAAAGGGGATATCGTAATTGCTAAAAGTCCATTTAATCCGAGGATGAATGTCTGTAAAAGAGTGATCGGAATCGAGGGGGATAAAGTGTGTACCAGCGAGCCCTCAGACacctttaaaacacacacttttGTACCACGAGGTCACGTGTGGTTGGAGGGAGATAACCTCAGTAACTCCACTGATTCGCGGAGCTATGGGCCGGTTCCCTACGCTCTGATCAGAGGGCGAGTGTGTTTAAAGCTGTGGCCTCCTGATAGTTTCGGGGTTCTGCGCGAGAGTCCGAACAGCGGGAGAATCCAAACCAGCACTGacagaaactgattattttataataaattaatattaattaa
>XM_022669474.1
atactaATCAAAAGCAAAATACGGTCAaatatcttaatttcttataatATTGTAtcttacttttaaacattttaagaggGCAGGTatatgttgttgttattataacaACATTTTCAAGCTATTGTCCTAATGTTTTGAGTGTACTTACTCTGTAAGTCATATGTGAGAGGCCCGTGATCTTGTGAAAATAACATCTGGCATGTGTGACGGTCTCCTGtaattattttgtaatgttACAGTGATTAAAGCTGCATCAAACTATAATGAATTGTCctagagatatacagtatttacagcatctgttactggctgatgttcattacaggtCACTGCCATCGTTGCTGGGATAGCTGGGGCTGCTGTAATTGGTCAGGACTAGGTTCAGCAACGTTATGTGAacaaagaatgagGGTGTGTGGTGCTGCTGTTGCGATGGTGTACAGGGTTTTGGGGAGAGCTCTAGGCTTTGTCGGCTTCACGGTTCAGTACGGCTGTATAGCACACTGTGCTTTCGAGTACATAGGAGAGTTTGTGGTGTGCTCTGGACCCTCAATGGAGCCCACTATCACTAACCACAATGTTGTTTTCTCTGAGCGCATCAGCAGACATCTGTACCGGATAGAAAAAGGGGATATCGTAATTGCTAAAAGTCCATTTAATCCGAGGATGAATGTCTGTAAAAGAGTGATCGGAATCGAGGGGGATAAAGTGTGTACCAGCGAGCCCTCAGACacctttaaaacacacacttttGTACCACGAGGTCACGTGTGGTTGGAGGGAGATAACCTCAGTAACTCCACTGATTCGCGGAGCTATGGGCCGGTTCCCTACGCTCTGATCAGAGGGCGAGTGTGTTTAAAGCTGTGGCCTCCTGATAGTTTCGGGGTTCTGCGCGAGAGTCCGAACAGCGGGAGAATCCAAACCAGCACTGacagaaactgattattttataataaattaatattaattaa

Function

symbol description
immp1l Predicted to enable serine-type endopeptidase activity and serine-type exopeptidase activity. Predicted to be involved in protein processing involved in protein targeting to mitochondrion. Predicted to act upstream of or within proteolysis. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial inner membrane peptidase complex. Orthologous to human IMMP1L (inner mitochondrial membrane peptidase subunit 1).

NR:

description
PREDICTED: mitochondrial inner membrane protease subunit 1

GO:

id name namespace
GO:0006627 protein processing involved in protein targeting to mitochondrion biological_process
GO:0006508 proteolysis biological_process
GO:0042720 mitochondrial inner membrane peptidase complex cellular_component
GO:0008236 serine-type peptidase activity molecular_function

KEGG:

id description
K09647 IMP1; mitochondrial inner membrane protease subunit 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007239783.3 False 651 mRNA 0.50 6 671881 681622
XM_007239784.2 False 847 mRNA 0.48 6 672073 681622
XM_022669474.1 True 974 mRNA 0.43 6 675749 681622

Neighbor

gene id symbol gene type direction distance location
LOC103036425 pax6,LOC103036425,LOC108444445 coding upstream 33986 618157 ~ 637895 (+)
cp cp,LOC100533122 coding upstream 138254 479272 ~ 533627 (+)
LOC103032607 LOC108439442 coding upstream 200677 461480 ~ 471204 (+)
LOC103032290 LOC108439433,LOC108271171 coding upstream 224566 417368 ~ 447315 (+)
wwtr1 wwtr1 coding upstream 291336 297267 ~ 380545 (+)
ankdd1a ankdd1a,LOC107685207 coding downstream 293315 974937 ~ 1000284 (+)
clpx clpx,clpxa,LOC107733949,LOC107737000,LOC107594724,LOC107600713 coding downstream 330017 1011639 ~ 1036934 (+)
ubap1l ubap1l,LOC107096871,LOC103363109,LOC105018181 coding downstream 366622 1048244 ~ 1071616 (+)
rasl12 rasl12,LOC107600716,LOC107685213,LOC107737003,LOC107594763 coding downstream 400929 1082551 ~ 1092167 (+)
LOC103024602 abhd2a,LOC108428500,LOC108270704,LOC107685211,LOC107733946,LOC107737001,LOC107662289 coding downstream 441721 1123343 ~ 1153288 (+)
LOC111192489 NA non-coding upstream 67954 601856 ~ 603927 (+)
G39459 NA non-coding upstream 124068 547609 ~ 547813 (+)
G39457 NA non-coding upstream 124529 547081 ~ 547352 (+)
G39452 NA non-coding upstream 132053 539498 ~ 539828 (+)
G39372 NA non-coding upstream 133549 537105 ~ 538332 (+)
G39504 NA non-coding downstream 31211 712833 ~ 715218 (+)
G39506 NA non-coding downstream 63946 745568 ~ 750620 (+)
G39511 snrpa1,LOC106587741 non-coding downstream 69200 750822 ~ 753837 (+)
G39512 NA non-coding downstream 85716 767338 ~ 767614 (+)
G39529 NA non-coding downstream 198063 879685 ~ 879896 (+)
commd2 commd2 other upstream 380859 281585 ~ 291022 (+)
plekho2 NA other downstream 241135 922757 ~ 963284 (+)
pdcd7 NA other downstream 356951 1038573 ~ 1045347 (+)
G39619 mrpl21 other downstream 525165 1206787 ~ 1209096 (+)
G39626 NA other downstream 538184 1219806 ~ 1220486 (+)
LOC111192492 NA other downstream 584235 1265857 ~ 1268385 (+)

Expression


Co-expression Network