zbtb37 (zbtb37,LOC107592717,LOC107669813,LOC107715094,LOC107588062,LOC107757485)


Basic Information

Item Value
gene id zbtb37
gene name zbtb37,LOC107592717,LOC107669813,LOC107715094,LOC107588062,LOC107757485
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 13989840 ~ 13998425 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007240110.3
GACTCGGGCGCGTTCGCTTTTCTGCAACTTGGCGCGAGACGGACGAGGCGCCTCCCTGTAGCCGGGCTGCTCGCTCGGAGCTCCGACTGCTCGCCGCGCTGCAGCACGCTGTCCTGACCGAGCCGGGGGCCACACGCTTCGGCCACAGCTGCTCGGAGCCCTCGGTCACTAGCATGGCCCCGTTTCTGCTGGTTCTCAGTGGCCTGACAACACATATTACTCGCGTTCAATCTATGCAAAGGGAGAATAGCAACTTCAGCCGCGAATTAATCTCGTAACCAGAACCTATTCGGGTAGCCATAAACGTGAAGTGCcataaaaattgtgattaatatTGAAGCTTTTAGCAGCAGTGTGAAGACAGCCCGCATGGAGCGAGCCGGCAGCATCCAGCTGGACATTCCAGACTTCAGCAACTCCGTTCTGTCCCACCTGAACCAGTTGCGCATGCAAGGGCGCCTGTGCGACATCGTGGTCAACGTGCAGGGCCAGAGCTTCCGCGCTCACAAAGTGGTCCTGGCCGCAAGCTCCCCCTACTTCAGGGACCACATGTCTCTCAGCGAGATGAGCACAGTGTCGCTGTCTGTGATCCGGAACCCCTCCGTGTTCGAGCAGCTCCTATCCTTCTGTTACACCGGCCGCCTGTGCCTGCAGCTGGCCGACATCATCAGCTACCTGACGGCAGCCAGCTTTCTGCAGATGCAGCACATCATCGACCGCTGCACACAGATTTTGGAGGGTATCCACTTCAAGATCAGCTTGGCAGACGTGGAAGAGGAGCTGGCAGGTGGGCAGGTCCTCAGAAGCAGCAGTCGGTCCATCGAGGCAGAAAGGGGCGGGGCCACGTTGCCAGGATCCCGTTCGATCAGCCCCAGGCACGGCGGCTCCAGAGTGATCACCACCCACAGCGGTGCTGGAGGGGTTCTGGATATCCGAGACGTCAGGGAGGTCCGCGAGGTGAGTCCGTCCGGAGAGTCAATGAGTCCACAGGTGGTGGAGCACAGCGGCCTGGGGGCTGAGGGCTCCATGTCAGGAAAGGAGCCCATACTCCGCATCAACAGGGCAGGGCAGTGGTACGTAGAGACGGGGTCTGAGATGGAAAGGGGCGGCGAGGACGCCGTGCGTGTGGTGGAAGGTCTGCGCATCAAGACGGAGCGGATGGAGGAGTGGATTGGGGCAGAAACTCAGGCATCGGCAGAGGAGGGCAGCGGGGCGGAGGAGGGGCCTACCATGATGATTGACACCTCAGGTCGCACATTGGTACAGGAGGGCTTCGTTACCGGGGCTTCCAGAGCCAAGAACTCTCAACCCTCCAGCAGCTTCAGTGAAACAGAGAGATTTAGCCCTACAGGCAGCGTGGTGGTGATGGCCGAGAGACCCAGGGCCAAAAGCGAGTCTCCAGGACGAGTGGATGACCAGAGGCACCCCACTTCTCAGGGAGAGGAGCCTGCAGTGTTCGACATGGGCGGCTATGAAGAGTACCTGCGGGAGCAGGTGGGCGACCGCTGGTTCCGTTACAATCCACGCCTCACCTGCATCTACTGCTGCAAGTCCTTCAACCAGAAGGGCAGCCTGGACCGGCACATGCGCCTGCACATGGGCATCACTCCCTTCGTGTGCCGCATGTGCGGAAAGAAGTACACGCGCAAGGACCAGCTGGAGTACCACATCCGCAAGCACACGGGCAACAAGCCCTTCCACTGCCACGTCTGCGGGAAGAGCTTCCCCTTCCAGGCCATCCTCAACCAGCACTTCCGCAAGAACCACCCGGGCTGCACGCCGCAGGAGGTGTCCCACAGCGCCTCGCCCGAGACCACCACAGTCACGTCCCGCGGCGGACAGAACGAGGATGAGTCGCCCGGCCAGGAGGACACCGCCGAGGGTAACGGAGCGCTAGGCAGAGGAGGCGGAGCTTCTTCCTTTGGAGAAGGGGTCCAGCCGTCTGTTTCCACCACTGGGCCTGACTGAAGGTGGCTCAGTGAGATTCAGGATAGGGTGTGGAGTCGGAGGGAGGTGGGAGGGGGGGTTAAGAAGAGAAAATGGGATGTTGAGCTATTTCGGGAGGTCCCTGCATCCCAGCGTTCACACTGAGCACGTGCGGAAAGAAGTGTCGAAAGAGCCAAGGGCTCTCTGGCTGCTTGGAAAGCTGCTGTCTGTCAGTGAAAAAAGAAATGGATGTAAACACAAGAAATGAAAcgtaactaaactaaacaaaaaagggGGCGGGGAATCAGCCGGATTAGACTGATTACTTACATGACGGTGGgccttttattttatcttctttatttttatttttagacgtCCTTTCAACTCtagaaaaaacaagacaacaCAACTAATGCAAAGAGAATGCTTCTAGTGTTCTTTAGGTATTTATGAAAACGATCTCTGCGCTTTAAACCGCATCTACCTTCACCGTACAACTGAACCGTTAACGTCAAGTAAATGAAGACATGCCACACTCCAACAACCTCACACACCACTGGATGCAgtgaattttcttttgtttttcttcttctttgtttatttgcctTTCCTGTCTTTTATAtatgttacagttttttatatttttgtacttcAACTTTATCAGTGAAGCTTCAGAAttcaggacaaaaaaaaagagagaaggagagatgttGTGGTTATGATTTGgtcaaaattgttgtttttgaaaagaaaaaaataattgccaAACTTCTCTGTGCCAGATGGTGATTATGGAAAAATAAGAGGGCATTCTGGTCCTCTGTCACTTTGCCTTGAGACAATCTTAATAAATCAGCCTGGGGTTCGACGCTGCTGCTCCCTGGCTTTAGGTAGgctagaaaatataaaaacggGTTCTGTTTGTGTTAGGGCCCCCTCAGGTCTGATGTAGCGTCAGATTcctaatttgtttatttcagaACAAGTGCCAACTTGGCTTGTCATTAAATTCTTACGTTTGCTATAAGTAGGCCTAAAAAAATAGCTATGAAACTGCTCAGGTCAGGGCGGCTCTTTAGCAGTGTTTTGACTTTTGACTCTGTGATTAGACCAGTGTTTCTCGGTCATGATCCTGCATATTGATAACTTTCTGTTCTTCAGACACACCTGATTGAACTAATCAGCTCATCAACAAGTCCTCTCAGAGTTGCAGggagtgtgttaaagcagggaaaccactgaaatgtgcagggcagggtTGCCTACAGAAGCaattactgtatgtactgtaggtCAGAGGTGGAGCCATGAGACTtgaaaataaaagctgataaaagctaattttagctcccCATCACTGAGCAATTAAGGAACAGAcagcagaagctgcagcatttaaggtgcaATAGAAgaatacaagaaaataaaagctgataaaagctaattttagctcccCATCACTGAGCAATTAAGGAACAGACAGCAATCATGAATTGCTGCACCACCagcccccctttctgaagacatttaaaggagaactctggtgtaaattagactttgggtgtagtaaaacatgatgataattacctttgttgaatagcacacctccgttctcccacaaactgtttatctatctatatgctTGTAGAGTTCTTCGATTTCTTAGTTGGAGGATTCCCCCCCTTACCCTTTTActtaaaaacaaggggtaggggaaCACATTAAAAATAGAATCAGGCGTAAGATAAGCTGCCTGGCTAAGAACTGATTGCATCACATTGACCATTTCATGCTAACGTACGACTTATCAAAAAAGCACTTAATCCGAGCTGATCActtgtgtaaccccacccatttaaaaaaatagatttatggCAGAGTTTTTTCCCCCAGTATTAACACAGGGAAAACTAACTGGTAAAATTAGACACTGGATGTGGACAGAgtttagaggagaaaaatgagatGAAAATCTTAAAATAGAAGCAAATGGTGAAGGGCagagctacacatcatactgcaaccagcctgtggtggcttcactttcaGTATAAATTTCACTGTCCGtgcttttctacagtcattgtgcaggaccaggattgagaaacactggaTTAGACTGACATTGGCACGTGGaacaacagaagaaaaaaaaaaa

Function

symbol description
zbtb37 Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleoplasm. Orthologous to human ZBTB37 (zinc finger and BTB domain containing 37).

NR:

description
PREDICTED: zinc finger and BTB domain-containing protein 37

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K10509 ZBTB37; zinc finger and BTB domain-containing protein 37

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007240110.3 True 4087 mRNA 0.50 4 13989840 13998425

Neighbor

gene id symbol gene type direction distance location
s1pr1 s1pr1,LOC107715096,LOC107592715,LOC107669844 coding upstream 5359 13981191 ~ 13984481 (+)
slc30a7 slc30a7,LOC107588064 coding upstream 98708 13861717 ~ 13891132 (+)
gpr88 gpr88 coding upstream 184734 13801468 ~ 13805106 (+)
cdc14a cdc14a coding upstream 196121 13710046 ~ 13793719 (+)
rtca rtca,LOC107715104,LOC107669846,LOC107653637 coding upstream 288957 13694856 ~ 13700883 (+)
mrpl54 mrpl54,LOC102788358 coding downstream 308298 14306723 ~ 14309631 (+)
LOC103040508 LOC108414270 coding downstream 314073 14312498 ~ 14333039 (+)
LOC103042131 LOC108424984 coding downstream 335670 14334095 ~ 14345180 (+)
LOC103041829 NA coding downstream 360784 14359209 ~ 14412035 (+)
bsg NA coding downstream 464225 14462650 ~ 14480454 (+)
G42220 LOC108429511,LOC100711005,LOC101481666,LOC102215641,LOC107731533,LOC103137085,LOC107715111 non-coding upstream 453814 13530352 ~ 13536026 (+)
G42209 NA non-coding upstream 514004 13472627 ~ 13475836 (+)
G42195 NA non-coding upstream 618035 13369304 ~ 13371805 (+)
G42182 NA non-coding upstream 622980 13366004 ~ 13366860 (+)
G42193 NA non-coding upstream 632610 13356659 ~ 13357230 (+)
G42389 NA non-coding downstream 495 13998920 ~ 14002697 (+)
G42386 NA non-coding downstream 23218 14021643 ~ 14025396 (+)
G42442 NA non-coding downstream 58173 14056598 ~ 14073336 (+)
G42446 NA non-coding downstream 88484 14086909 ~ 14146357 (+)
G42469 NA non-coding downstream 161980 14160405 ~ 14160711 (+)
LOC103037142 LOC108429501 other upstream 132479 13810833 ~ 13857361 (+)
LOC103034435 NA other upstream 367798 13617083 ~ 13622042 (+)
LOC103032215 NA other upstream 467583 13509020 ~ 13522257 (+)
G42208 ier5 other upstream 539363 13448592 ~ 13450477 (+)
G42096 LOC108429524,LOC108271269,LOC103369106,LOC106613566,LOC106574586 other upstream 1274812 12705559 ~ 12715028 (+)
eps15l1 eps15l1 other downstream 71998 14070423 ~ 14134546 (+)
G42605 NA other downstream 896637 14895062 ~ 14899248 (+)
LOC103036127 cunh19orf24 other downstream 1980061 15978486 ~ 15984632 (+)
LOC103040819 reep6,LOC107698004,LOC107745351,LOC107658751 other downstream 2442506 16440931 ~ 16446287 (+)
LOC103044285 NA other downstream 2818176 16816601 ~ 16819251 (+)

Expression


Co-expression Network